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LOC4330619 pentatricopeptide repeat-containing protein At3g22690 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4330619, updated on 16-Jun-2026
Gene symbol
LOC4330619
Gene description
pentatricopeptide repeat-containing protein At3g22690
Locus tag
OSNPB_020730900
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See LOC4330619 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (30942246..30943712, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (30447887..30451459, complement)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene aspartyl protease APCB1 Neighboring gene organelle RRM domain-containing protein 1, chloroplastic-like Neighboring gene MADS-box transcription factor 57-like Neighboring gene uncharacterized LOC9272559 Neighboring gene basic blue protein

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in RNA modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular membrane-bounded organelle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
pentatricopeptide repeat-containing protein At3g22690
Names
OSJNBa0072H09.44
Os02g0730900
P0617A09.23
pentatricopeptide (PPR) repeat-containing protein-like

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    30942246..30943712 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015767584.3 → XP_015623070.1  pentatricopeptide repeat-containing protein At3g22690

    UniProtKB/TrEMBL
    A2X992, Q6YWP8
    Conserved Domains (2) summary
    PLN03077
    Location:81 → 488
    PLN03077; Protein ECB2; Provisional
    sd00004
    Location:267 → 293
    PPR; PPR repeat [structural motif]
Nucleotide Protein
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