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LOC4330594 amino acid transporter AVT6A [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4330594, updated on 16-Jun-2026
Gene symbol
LOC4330594
Gene description
amino acid transporter AVT6A
Locus tag
OSNPB_020727100
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See LOC4330594 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (30751369..30756255, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (30259643..30265677, complement)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene protein TIC 20-v, chloroplastic Neighboring gene transcription factor BIM2 Neighboring gene uncharacterized LOC136355199 Neighboring gene putative U-box domain-containing protein 42 Neighboring gene small nucleolar RNA R160

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-amino acid transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in amino acid transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
amino acid transporter AVT6A
Names
B1121A12.26
Os02g0727100
putative amino acid transporter
sodium-coupled neutral amino acid transporter 1

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    30751369..30756255 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026022876.2 → XP_025878661.1  amino acid transporter AVT6A

    UniProtKB/TrEMBL
    A2X963, B7EFZ1, Q6Z336
    Conserved Domains (1) summary
    cl00456
    Location:34 → 410
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain

  2. XM_015767965.3 → XP_015623451.1  amino acid transporter AVT6A

    UniProtKB/TrEMBL
    A2X963, B7EFZ1, Q6Z336
    Conserved Domains (1) summary
    cl00456
    Location:34 → 410
    SLC5-6-like_sbd; Solute carrier families 5 and 6-like; solute binding domain
Nucleotide Protein
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