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LOC4329192 GTPase activating protein 1-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4329192, updated on 6-Sep-2025
Gene symbol
LOC4329192
Gene description
GTPase activating protein 1-like
Locus tag
OSNPB_020327000
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
GAP1; GPBP1; OsGAP1; OsGPBP1; OsJ_06508
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See LOC4329192 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (13209453..13212409)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (13173635..13176226)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene ARF guanine-nucleotide exchange factor GNOM Neighboring gene RHOMBOID-like protein 9, chloroplastic Neighboring gene ADP-ribosylation factor-like protein 2 Neighboring gene glycosyltransferase BC10-like

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. A structure model explaining the binding between a ubiquitous unconventional G-protein (OsYchF1) and a plant-specific C2-domain protein (OsGAP1) from rice. Cheung MY, et al. Biochem J, 2020 Oct 30. PMID 32955089
  2. An ancient P-loop GTPase in rice is regulated by a higher plant-specific regulatory protein. Cheung MY, et al. J Biol Chem, 2010 Nov 26. PMID 20876569, Free PMC Article
  3. Expression of a RING-HC protein from rice improves resistance to Pseudomonas syringae pv. tomato DC3000 in transgenic Arabidopsis thaliana. Cheung MY, et al. J Exp Bot, 2007. PMID 18182423
  4. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. A structure model explaining the binding between a ubiquitous unconventional G-protein (OsYchF1) and a plant-specific C2-domain protein (OsGAP1) from rice.
    Title: A structure model explaining the binding between a ubiquitous unconventional G-protein (OsYchF1) and a plant-specific C2-domain protein (OsGAP1) from rice.
  2. GTPase/ATPase activities and RNA binding capacity of YchF(BAD03576) is regulated by GAP1(BAD15699).
    Title: An ancient P-loop GTPase in rice is regulated by a higher plant-specific regulatory protein.
Submit: New GeneRIF Correction

Homology

Preferred Names
gTPase activating protein 1
Names
C2 domain-containing protein-like
G-protein binding protein 1
LOC_Os02g22130
OSJNBb0042G06.10
P0476C12.36

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001416584.1 → NP_001403513.1  gTPase activating protein 1

    Status: VALIDATED

    Source sequence(s)
    AK104165, AU182292, C28303, CI264416
    UniProtKB/Swiss-Prot
    A0A0N7KF73, A2X479, Q6YWF1

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    13209453..13212409
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6YWF1.1 GenPept UniProtKB/Swiss-Prot:Q6YWF1

Gene LinkOut

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Research Materials