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LOC4328629 ADP-ribosylation factor GTPase-activating protein AGD12 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4328629, updated on 16-Jun-2026
Gene symbol
LOC4328629
Gene description
ADP-ribosylation factor GTPase-activating protein AGD12
Locus tag
OSNPB_020198300
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See LOC4328629 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (5515630..5519000)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (5505041..5508422)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4328627 Neighboring gene probable calcium-binding protein CML21 Neighboring gene small nucleolar RNA R11/Z151 Neighboring gene small nucleolar RNA Z152/R70/R12

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
ADP-ribosylation factor GTPase-activating protein AGD12
Names
Os02g0198300
P0026H03.16-1
putative zinc finger and C2 domain protein
zinc finger protein F35

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    5515630..5519000
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015767492.3 → XP_015622978.1  ADP-ribosylation factor GTPase-activating protein AGD12

    UniProtKB/TrEMBL
    A0A5S6R781, A2X226, B7E543, Q0E318, Q6H738
    Conserved Domains (2) summary
    cd04038
    Location:163 → 307
    C2_ArfGAP; C2 domain present in Arf GTPase Activating Proteins (GAP)
    cd08204
    Location:14 → 120
    ArfGap; GTPase-activating protein (GAP) for the ADP ribosylation factors (ARFs)

  2. XM_015767490.3 → XP_015622976.1  ADP-ribosylation factor GTPase-activating protein AGD12

    UniProtKB/TrEMBL
    A0A5S6R781, A2X226, B7E543, Q0E318, Q6H738
    Conserved Domains (2) summary
    cd04038
    Location:163 → 307
    C2_ArfGAP; C2 domain present in Arf GTPase Activating Proteins (GAP)
    cd08204
    Location:14 → 120
    ArfGap; GTPase-activating protein (GAP) for the ADP ribosylation factors (ARFs)

  3. XM_015767491.3 → XP_015622977.1  ADP-ribosylation factor GTPase-activating protein AGD12

    UniProtKB/TrEMBL
    A0A5S6R781, A2X226, B7E543, Q0E318, Q6H738
    Conserved Domains (2) summary
    cd04038
    Location:163 → 307
    C2_ArfGAP; C2 domain present in Arf GTPase Activating Proteins (GAP)
    cd08204
    Location:14 → 120
    ArfGap; GTPase-activating protein (GAP) for the ADP ribosylation factors (ARFs)
Nucleotide Protein
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