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LOC4328517 proteasome subunit beta type-3-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4328517, updated on 12-Jul-2024
Gene symbol
LOC4328517
Gene description
proteasome subunit beta type-3-like
Locus tag
OSNPB_020182500
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1297_C09.31
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See LOC4328517 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (4608447..4610947, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (4598621..4601422, complement)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene two-component response regulator ORR24-like Neighboring gene zinc finger protein 1 Neighboring gene probable receptor-like protein kinase At1g80640 Neighboring gene uncharacterized LOC4328519

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of proteasome core complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome core complex, beta-subunit complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
proteasome subunit beta type-3-like
Names
Os02g0182500
Proteasome subunit beta type 3

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    4608447..4610947 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015772218.3 → XP_015627704.1  proteasome subunit beta type-3-like

    UniProtKB/TrEMBL
    A0A0P0VFM2, A2X1N4, A3A3U3, Q6H800
    Conserved Domains (1) summary
    cd03759
    Location:6 → 200
    proteasome_beta_type_3; proteasome beta type-3 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that ...
Nucleotide Protein
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