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LOC4327296 probable sarcosine oxidase [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4327296, updated on 3-Dec-2024
Gene symbol
LOC4327296
Gene description
probable sarcosine oxidase
Locus tag
OSNPB_010316100
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (11985970..11987541, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (11944157..11945636, complement)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene caffeoylshikimate esterase Neighboring gene UDP-glucuronic acid decarboxylase 4 Neighboring gene uncharacterized LOC4327262 Neighboring gene serine/arginine-rich-splicing factor SR34-like

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables flavin adenine dinucleotide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sarcosine oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
probable sarcosine oxidase
Names
B1012D10.43
Os01g0316100
putative L-pipecolic acid oxidase

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    11985970..11987541 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015789273.3 → XP_015644759.3  probable sarcosine oxidase

    UniProtKB/TrEMBL
    A0A0P0V1M3
Nucleotide Protein
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