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LOC4326342 sugar transport protein MST8-like [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4326342, updated on 4-Oct-2018

Summary

Gene symbol
LOC4326342
Gene description
sugar transport protein MST8-like
Locus tag
OSNPB_010567500
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
MST8
Expression
Restricted expression toward flowers (RPKM 9.5) See more

Genomic context

See LOC4326342 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
102 current IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (21719740..21722138)

Chromosome 1 - NC_029256.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4326339 Neighboring gene keratin, type II cytoskeletal 1 Neighboring gene sugar transport protein MST7-like Neighboring gene cysteine-rich receptor-like protein kinase 10

Genomic regions, transcripts, and products

Genomic Sequence:
NC_029256.1 Chromosome 1 Reference IRGSP-1.0 Primary Assembly

Expression

  • Project title: Transcriptome profiling of various organs at different developmental stages in rice
  • Description: Transcriptom profiling in flower buds, flowers, flag leaves and roots sampled before flowering and after flowering, milk grains and mature seeds
  • BioProject: PRJNA243371
  • Publication: PMID 26387578
  • Analysis date: Fri Dec 15 20:02:59 2017

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

General gene information

Gene Ontology Provided by Gramene

Function Evidence Code Pubs
carbohydrate:proton symporter activity RCA
inferred from Reviewed Computational Analysis
more info
 
transporter activity RCA
inferred from Reviewed Computational Analysis
more info
 
Process Evidence Code Pubs
carbohydrate transport RCA
inferred from Reviewed Computational Analysis
more info
 
transport RCA
inferred from Reviewed Computational Analysis
more info
 
Component Evidence Code Pubs
cytoplasmic vesicle RCA
inferred from Reviewed Computational Analysis
more info
 
membrane RCA
inferred from Reviewed Computational Analysis
more info
 

General protein information

Preferred Names
sugar transport protein MST8-like
Names
Os01g0567500
P0002B05.20
monosaccharide transporter 8
putative monosaccharide transport protein
sugar carrier protein C

NCBI Reference Sequences (RefSeq)

RefSeqs of Annotated Genomes: Oryza sativa Japonica Group Annotation Release 102

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference IRGSP-1.0 Primary Assembly

Genomic

  1. NC_029256.1 Reference IRGSP-1.0 Primary Assembly

    Range
    21719740..21722138
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015787266.2XP_015642752.1  sugar transport protein MST8-like

    UniProtKB/Swiss-Prot
    Q94EC4
    Conserved Domains (1) summary
    pfam00083
    Location:27489
    Sugar_tr; Sugar (and other) transporter
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