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LOC4326176 nuclear pore complex protein NUP85 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4326176, updated on 16-Jun-2026
Gene symbol
LOC4326176
Gene description
nuclear pore complex protein NUP85
Locus tag
OSNPB_010746200
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See LOC4326176 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (31803159..31810958)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (31203450..31211275)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC4326173 Neighboring gene GATA transcription factor 12 Neighboring gene uncharacterized LOC136355491 Neighboring gene carotenoid cleavage dioxygenase 8 homolog B, chloroplastic

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of nuclear pore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA export from nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nuclear pore outer ring IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
nuclear pore complex protein NUP85
Names
OSJNBa0014K08.33-1
OSJNBa0014K08.33-2
Os01g0746200
putative nucleoporin Nup75

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    31803159..31810958
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015766467.3 → XP_015621953.1  nuclear pore complex protein NUP85

    UniProtKB/TrEMBL
    B8A9E5, Q0JJD6, Q8LIZ0
    Conserved Domains (1) summary
    pfam07575
    Location:97 → 694
    Nucleopor_Nup85; Nup85 Nucleoporin
Nucleotide Protein
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