U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC4325332 probable choline kinase 1 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4325332, updated on 3-Dec-2024
Gene symbol
LOC4325332
Gene description
probable choline kinase 1
Locus tag
OSNPB_010183000
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
P0489A01.7; P0489A01.8
Try the new Gene page
Try the new Transcripts and proteins table
See LOC4325332 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (4404469..4407960)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (4393565..4397180)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC136354209 Neighboring gene uncharacterized LOC4325331 Neighboring gene probable U3 small nucleolar RNA-associated protein 7 Neighboring gene type IV inositol polyphosphate 5-phosphatase 3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables choline kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ethanolamine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylcholine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
probable choline kinase 1
Names
Os01g0183000
putative choline kinase

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    4404469..4407960
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_066309541.1 → XP_066165638.1  probable choline kinase 1 isoform X2

    UniProtKB/TrEMBL
    A0A0P0UZE8, B8ADL7, Q0JQ41

  2. XM_015794575.3 → XP_015650061.1  probable choline kinase 1 isoform X1

    UniProtKB/TrEMBL
    Q5VRY8
    Conserved Domains (1) summary
    PLN02236
    Location:76 → 422
    PLN02236; choline kinase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials