U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC4325167 glutamate--tRNA ligase, cytoplasmic [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4325167, updated on 16-Jun-2026
Gene symbol
LOC4325167
Gene description
glutamate--tRNA ligase, cytoplasmic
Locus tag
OSNPB_010271200
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Try the new Gene page
Try the new Transcripts and proteins table
See LOC4325167 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (9386699..9391167, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (9373753..9378224, complement)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene peroxidase 24 Neighboring gene phosphatidylinositol 4-kinase gamma 1 Neighboring gene uncharacterized LOC4325165 Neighboring gene ATP-dependent Clp protease proteolytic subunit-related protein 4, chloroplastic Neighboring gene NEDD8-activating enzyme E1 catalytic subunit

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glutamate-tRNA ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glutamyl-tRNA aminoacylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of methionyl glutamyl tRNA synthetase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
glutamate--tRNA ligase, cytoplasmic
Names
Os01g0271200
P0693B08.12
putative multifunctional amino acid-tRNA ligase

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    9386699..9391167 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015795971.3 → XP_015651457.1  glutamate--tRNA ligase, cytoplasmic

    UniProtKB/TrEMBL
    A2WNB8, Q0JNQ8, Q9LIZ8
    Conserved Domains (1) summary
    PLN02907
    Location:1 → 715
    PLN02907; glutamate-tRNA ligase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials