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LOC4324687 vesicle transport v-SNARE 13 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4324687, updated on 16-Jun-2026
Gene symbol
LOC4324687
Gene description
vesicle transport v-SNARE 13
Locus tag
OSNPB_010560200
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See LOC4324687 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (21845804..21848990)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (21275583..21278815)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene vacuolar-processing enzyme Neighboring gene IAA-amino acid hydrolase ILR1-like 1 Neighboring gene uncharacterized LOC9269541 Neighboring gene ent-cassadiene C11-alpha-hydroxylase 1-like

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SNAP receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables SNARE binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle fusion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ER to Golgi transport vesicle membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of SNARE complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in late endosome membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
vesicle transport v-SNARE 13
Names
B1064G04.46
Os01g0560200
vesicle transport v-SNARE (vesicle soluble NSF attachment protein receptor) protein-like

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    21845804..21848990
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015767415.3 → XP_015622901.1  vesicle transport v-SNARE 13

    UniProtKB/TrEMBL
    A2WRE6, B7ESI6, Q0JLW6, Q8S9S2
    Conserved Domains (2) summary
    cd15862
    Location:127 → 186
    SNARE_Vti1; SNARE motif of Vti1
    pfam05008
    Location:12 → 89
    V-SNARE; Vesicle transport v-SNARE protein N-terminus
Nucleotide Protein
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