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LOC4324480 2-oxoglutarate and iron-dependent oxygenase domain-containing protein CP2 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 4324480, updated on 16-Jun-2026
Gene symbol
LOC4324480
Gene description
2-oxoglutarate and iron-dependent oxygenase domain-containing protein CP2
Locus tag
OSNPB_010502400
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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See LOC4324480 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 1 NC_089035.1 (17954580..17964648)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 1 NC_029256.1 (17394210..17404407)

Chromosome 1 - NC_089035.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107280859 Neighboring gene palmitoyl-acyl carrier protein thioesterase, chloroplastic Neighboring gene uncharacterized LOC136357069 Neighboring gene probable histone H2A.5

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
2-oxoglutarate and iron-dependent oxygenase domain-containing protein CP2
Names
B1080D07.43
Os01g0502400
P0507H06.16
oxidoreductase, 2OG-Fe(II) oxygenase-like protein

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089035.1 Reference ASM3414082v1 Primary Assembly

    Range
    17954580..17964648
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015766821.3 → XP_015622307.1  2-oxoglutarate and iron-dependent oxygenase domain-containing protein CP2

    UniProtKB/TrEMBL
    B7EYW8, B8A8L9, Q5QMV1, Q5QN11
    Conserved Domains (1) summary
    smart00702
    Location:173 → 343
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
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