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gcnt2.2.L glucosaminyl (N-acetyl) transferase 2 (I blood group), gene 2 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 432275, updated on 11-Apr-2024

Summary

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Official Symbol
gcnt2.2.L
Official Full Name
glucosaminyl (N-acetyl) transferase 2 (I blood group), gene 2 L homeolog
Primary source
Xenbase:XB-GENE-865984
Locus tag
XELAEV_18031638mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
gcnt2; gcnt2.L
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Genomic context

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See gcnt2.2.L in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (95596283..95635549)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (88844513..88883775)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene to transcription factor AP-2 alpha L homeolog Neighboring gene N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase Neighboring gene PAK1 interacting protein 1 L homeolog Neighboring gene transmembrane protein 14C L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC82474

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase
Names
glucosaminyl (N-acetyl) transferase 2 (I blood group) L homeolog
glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group) L homeolog
NP_001085190.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091721.1 → NP_001085190.1  N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase

    See identical proteins and their annotated locations for NP_001085190.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072294
    UniProtKB/TrEMBL
    A0A974CNP4, Q6INI6
    Conserved Domains (1) summary
    pfam02485
    Location:98 → 355
    Branch; Core-2/I-Branching enzyme

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    95596283..95635549
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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