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nudt5.L nudix hydrolase 5 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 432263, updated on 4-Jan-2025

Summary

Official Symbol
nudt5.L
Official Full Name
nudix hydrolase 5 L homeolog
Primary source
Xenbase:XB-GENE-980637
Locus tag
XELAEV_18017834mg
See related
EnsemblRapid:ENSXLAG00005035959 AllianceGenome:Xenbase:XB-GENE-980637
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
nudt5
Summary
Predicted to enable pyrophosphatase activity. Orthologous to human NUDT5 (nudix hydrolase 5). [provided by Alliance of Genome Resources, Jan 2025]
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Genomic context

See nudt5.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (88115714..88130308)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (72780122..72794716)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108711220 Neighboring gene calcium/calmodulin dependent protein kinase ID S homeolog Neighboring gene cell division cycle 123 L homeolog Neighboring gene dehydrogenase E1 and transketolase domain containing 1 L homeolog Neighboring gene UPF2, regulator of nonsense mediated mRNA decay L homeolog

Genomic regions, transcripts, and products

General protein information

Preferred Names
nudix-type motif 5
Names
nudix (nucleoside diphosphate linked moiety X)-type motif 5
NP_001085179.1
XP_018106384.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091710.1NP_001085179.1  nudix-type motif 5

    See identical proteins and their annotated locations for NP_001085179.1

    Status: PROVISIONAL

    Source sequence(s)
    BC072350
    UniProtKB/TrEMBL
    A0A974DDY2, Q6IND3
    Related
    ENSXLAP00005107512.1, ENSXLAT00005109640.1
    Conserved Domains (1) summary
    cd03424
    Location:62209
    ADPRase_NUDT5; ADP-ribose pyrophosphatase (ADPRase) catalyzes the hydrolysis of ADP-ribose and a variety of additional ADP-sugar conjugates to AMP and ribose-5-phosphate. Like other members of the Nudix hydrolase superfamily, it requires a divalent cation, such as Mg2+, ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    88115714..88130308
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018250895.2XP_018106384.1  nudix-type motif 5 isoform X1

    UniProtKB/TrEMBL
    A0A974DDY2, Q6IND3