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suv39h1.L suppressor of variegation 3-9 homolog 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 431943, updated on 3-Sep-2017
Official Symbol
suv39h1.L
Official Full Name
suppressor of variegation 3-9 homolog 1 L homeolog
Primary source
Xenbase:XB-GENE-6049313
Locus tag
XELAEV_18038114mg
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
kmt1a; suv39h; suv39h1
See suv39h1.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
6
Annotation release Status Assembly Chr Location
100 current Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (618152..622132)

Chromosome 8L - NC_030738.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 38 member 5 L homeolog Neighboring gene Wiskott-Aldrich syndrome L homeolog Neighboring gene WD repeat domain 13 L homeolog Neighboring gene uncharacterized LOC108698093

Genomic Sequence:
NC_030738.1 Chromosome 8L Reference Xenopus_laevis_v2 Primary Assembly

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Products Interactant Other Gene Complex Source Pubs Description
Preferred Names
histone-lysine N-methyltransferase SUV39H1
Names
su(var)3-9 homolog 1
NP_001084892.1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001091423.1NP_001084892.1  histone-lysine N-methyltransferase SUV39H1

    See identical proteins and their annotated locations for NP_001084892.1

    Status: PROVISIONAL

    Source sequence(s)
    BC070805
    UniProtKB/Swiss-Prot
    Q6NRE8
    Conserved Domains (3) summary
    smart00317
    Location:252375
    SET; SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
    cd00024
    Location:4593
    CHROMO; Chromatin organization modifier (chromo) domain is a conserved region of around 50 amino acids found in a variety of chromosomal proteins, which appear to play a role in the functional organization of the eukaryotic nucleus. Experimental evidence ...
    pfam05033
    Location:155244
    Pre-SET; Pre-SET motif

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v2 Primary Assembly

Genomic

  1. NC_030738.1 Reference Xenopus_laevis_v2 Primary Assembly

    Range
    618152..622132
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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