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rgcc regulator of cell cycle [ Danio rerio (zebrafish) ]

Gene ID: 431737, updated on 27-Mar-2024

Summary

Official Symbol
rgccprovided by ZNC
Official Full Name
regulator of cell cycleprovided by ZNC
Primary source
ZFIN:ZDB-GENE-040704-31
See related
Ensembl:ENSDARG00000035810 AllianceGenome:ZFIN:ZDB-GENE-040704-31
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
sb:cb658; zgc:91870; wu:fa94a05
Summary
Predicted to act upstream of or within regulation of cell cycle. Is expressed in several structures, including anterior neural keel; nervous system; neural plate; neural tube; and presumptive diencephalon. Orthologous to human RGCC (regulator of cell cycle). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

See rgcc in Genome Data Viewer
Location:
chromosome: 9
Exon count:
5
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (17438788..17449872)
105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (17431076..17442160)

Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene zgc:101559 Neighboring gene kelch repeat and BTB (POZ) domain containing 7 Neighboring gene von Willebrand factor A domain containing 8 Neighboring gene diacylglycerol kinase, eta

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
regulator of cell cycle RGCC

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002190.1NP_001002190.1  regulator of cell cycle RGCC

    See identical proteins and their annotated locations for NP_001002190.1

    Status: PROVISIONAL

    Source sequence(s)
    BC074041
    UniProtKB/TrEMBL
    Q6GMK3
    Related
    ENSDARP00000118377.1, ENSDART00000138953.2
    Conserved Domains (1) summary
    pfam15151
    Location:1123
    RGCC; Response gene to complement 32 protein family

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007120.7 Reference GRCz11 Primary Assembly

    Range
    17438788..17449872
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394745.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    633111..644195
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_2

Genomic

  1. NW_018395276.1 Reference GRCz11 ALT_DRER_TU_2

    Range
    301947..313031
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_3

Genomic

  1. NW_018395383.1 Reference GRCz11 ALT_DRER_TU_3

    Range
    172050..183134
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)