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S100Z S100 calcium binding protein Z [ Gallus gallus (chicken) ]

Gene ID: 431598, updated on 14-Feb-2019

Summary

Symbol
S100Zprovided by CGNC
Full Name
S100 calcium binding protein Zprovided by CGNC
Primary source
CGNC:11139
See related
Ensembl:ENSGALG00000014989
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs

Genomic context

See S100Z in Genome Data Viewer
Location:
chromosome: Z
Exon count:
4
Annotation release Status Assembly Chr Location
104 current GRCg6a (GCF_000002315.5) Z NC_006127.5 (23387503..23392421, complement)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) Z NC_006127.4 (23387570..23392488, complement)
102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) Z NC_006127.3 (23246476..23251358, complement)

Chromosome Z - NC_006127.5Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107051953 Neighboring gene angiogenic factor with G-patch and FHA domains 1 Neighboring gene corticotropin releasing hormone binding protein Neighboring gene F2R like trypsin receptor 1 Neighboring gene uncharacterized LOC100857549 Neighboring gene coagulation factor II thrombin receptor

Genomic regions, transcripts, and products

General gene information

Homology

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001302198.1NP_001289127.1  protein S100-Z

    Status: VALIDATED

    Source sequence(s)
    AC202799
    UniProtKB/TrEMBL
    E1C1S0
    Related
    ENSGALP00000024131.5, ENSGALT00000024177.6
    Conserved Domains (2) summary
    cd05026
    Location:193
    S-100Z; S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand ...
    pfam13499
    Location:2879
    EF-hand_7; EF-hand domain pair

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCg6a Primary Assembly

Genomic

  1. NC_006127.5 Reference GRCg6a Primary Assembly

    Range
    23387503..23392421 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015277353.2XP_015132839.1  protein S100-Z isoform X1

    UniProtKB/TrEMBL
    E1C1S0
    Conserved Domains (2) summary
    cd05026
    Location:193
    S-100Z; S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand ...
    pfam13499
    Location:2879
    EF-hand_7; EF-hand domain pair
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