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HNF4G hepatocyte nuclear factor 4 gamma [ Gallus gallus (chicken) ]

Gene ID: 428364, updated on 17-Aug-2024
Symbol
HNF4Gprovided by CGNC
Full Name
hepatocyte nuclear factor 4 gammaprovided by CGNC
Primary source
CGNC:11688
See related
Ensembl:ENSGALG00010003619
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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See HNF4G in Genome Data Viewer
Location:
chromosome: 2
Exon count:
16
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (118393257..118453285)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (118397116..118457153)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene peptidase inhibitor 15 Neighboring gene cysteine rich secretory protein LCCL domain containing 1 Neighboring gene uncharacterized LOC107051826 Neighboring gene uncharacterized LOC124417686

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in anatomical structure development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
hepatocyte nuclear factor 4-gamma

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    118393257..118453285
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046929612.1 → XP_046785568.1  hepatocyte nuclear factor 4-gamma isoform X3

  2. XM_025148002.3 → XP_025003770.1  hepatocyte nuclear factor 4-gamma isoform X3

    Conserved Domains (2) summary
    cd06931
    Location:103 → 324
    NR_LBD_HNF4_like; The ligand binding domain of heptocyte nuclear factor 4, which is explosively expanded in nematodes
    cd06960
    Location:12 → 87
    NR_DBD_HNF4A; DNA-binding domain of heptocyte nuclear factor 4 (HNF4) is composed of two C4-type zinc fingers

  3. XM_025148003.3 → XP_025003771.1  hepatocyte nuclear factor 4-gamma isoform X3

    Conserved Domains (2) summary
    cd06931
    Location:103 → 324
    NR_LBD_HNF4_like; The ligand binding domain of heptocyte nuclear factor 4, which is explosively expanded in nematodes
    cd06960
    Location:12 → 87
    NR_DBD_HNF4A; DNA-binding domain of heptocyte nuclear factor 4 (HNF4) is composed of two C4-type zinc fingers

  4. XM_046929610.1 → XP_046785566.1  hepatocyte nuclear factor 4-gamma isoform X3

  5. XM_025148004.3 → XP_025003772.1  hepatocyte nuclear factor 4-gamma isoform X3

    Conserved Domains (2) summary
    cd06931
    Location:103 → 324
    NR_LBD_HNF4_like; The ligand binding domain of heptocyte nuclear factor 4, which is explosively expanded in nematodes
    cd06960
    Location:12 → 87
    NR_DBD_HNF4A; DNA-binding domain of heptocyte nuclear factor 4 (HNF4) is composed of two C4-type zinc fingers

  6. XM_025148001.3 → XP_025003769.1  hepatocyte nuclear factor 4-gamma isoform X1

    UniProtKB/TrEMBL
    A0A8V0XE41
    Related
    ENSGALP00010004945.1, ENSGALT00010008396.1
    Conserved Domains (2) summary
    cd06931
    Location:150 → 371
    NR_LBD_HNF4_like; The ligand binding domain of heptocyte nuclear factor 4, which is explosively expanded in nematodes
    cd06960
    Location:59 → 134
    NR_DBD_HNF4A; DNA-binding domain of heptocyte nuclear factor 4 (HNF4) is composed of two C4-type zinc fingers

  7. XM_015282870.4 → XP_015138356.1  hepatocyte nuclear factor 4-gamma isoform X2

    UniProtKB/TrEMBL
    A0A8V0XA13
    Related
    ENSGALP00010004946.1, ENSGALT00010008398.1
    Conserved Domains (2) summary
    cd06931
    Location:150 → 371
    NR_LBD_HNF4_like; The ligand binding domain of heptocyte nuclear factor 4, which is explosively expanded in nematodes
    cd06960
    Location:59 → 134
    NR_DBD_HNF4A; DNA-binding domain of heptocyte nuclear factor 4 (HNF4) is composed of two C4-type zinc fingers

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    118397116..118457153
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046911845.1 → XP_046767801.1  hepatocyte nuclear factor 4-gamma isoform X3

  2. XM_040665910.2 → XP_040521844.1  hepatocyte nuclear factor 4-gamma isoform X3

    Conserved Domains (2) summary
    cd06931
    Location:103 → 324
    NR_LBD_HNF4_like; The ligand binding domain of heptocyte nuclear factor 4, which is explosively expanded in nematodes
    cd06960
    Location:12 → 87
    NR_DBD_HNF4A; DNA-binding domain of heptocyte nuclear factor 4 (HNF4) is composed of two C4-type zinc fingers

  3. XM_040665909.2 → XP_040521843.1  hepatocyte nuclear factor 4-gamma isoform X3

    Conserved Domains (2) summary
    cd06931
    Location:103 → 324
    NR_LBD_HNF4_like; The ligand binding domain of heptocyte nuclear factor 4, which is explosively expanded in nematodes
    cd06960
    Location:12 → 87
    NR_DBD_HNF4A; DNA-binding domain of heptocyte nuclear factor 4 (HNF4) is composed of two C4-type zinc fingers

  4. XM_046911844.1 → XP_046767800.1  hepatocyte nuclear factor 4-gamma isoform X3

  5. XM_040665908.2 → XP_040521842.1  hepatocyte nuclear factor 4-gamma isoform X3

    Conserved Domains (2) summary
    cd06931
    Location:103 → 324
    NR_LBD_HNF4_like; The ligand binding domain of heptocyte nuclear factor 4, which is explosively expanded in nematodes
    cd06960
    Location:12 → 87
    NR_DBD_HNF4A; DNA-binding domain of heptocyte nuclear factor 4 (HNF4) is composed of two C4-type zinc fingers

  6. XM_040665906.2 → XP_040521840.1  hepatocyte nuclear factor 4-gamma isoform X1

    UniProtKB/TrEMBL
    A0A8V0XE41
    Conserved Domains (2) summary
    cd06931
    Location:150 → 371
    NR_LBD_HNF4_like; The ligand binding domain of heptocyte nuclear factor 4, which is explosively expanded in nematodes
    cd06960
    Location:59 → 134
    NR_DBD_HNF4A; DNA-binding domain of heptocyte nuclear factor 4 (HNF4) is composed of two C4-type zinc fingers

  7. XM_040665907.2 → XP_040521841.1  hepatocyte nuclear factor 4-gamma isoform X2

    UniProtKB/TrEMBL
    A0A8V0XA13
    Conserved Domains (2) summary
    cd06931
    Location:150 → 371
    NR_LBD_HNF4_like; The ligand binding domain of heptocyte nuclear factor 4, which is explosively expanded in nematodes
    cd06960
    Location:59 → 134
    NR_DBD_HNF4A; DNA-binding domain of heptocyte nuclear factor 4 (HNF4) is composed of two C4-type zinc fingers
Nucleotide Protein
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