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H2BC38 H2B clustered histone 38 [ Gallus gallus (chicken) ]

Gene ID: 427886, updated on 17-Aug-2024

Summary

Official Symbol
H2BC38provided by CGNC
Official Full Name
H2B clustered histone 38provided by CGNC
Primary source
CGNC:53217
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
H2B-VIII; HIST1H2B8; HIST1H2BO
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Genomic context

See H2BC38 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (48128472..48129293)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (48425255..48426075)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene H4 clustered histone 33 Neighboring gene H2A clustered histone 38 Neighboring gene H3 clustered histone 37 Neighboring gene H4 clustered histone 36

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
histone H2B 8
Names
H2B VIII
histone cluster 1, H2B-VIII
histone cluster 1, H2bo

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031481.2NP_001026652.1  histone H2B 8

    See identical proteins and their annotated locations for NP_001026652.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000012
    UniProtKB/Swiss-Prot
    Q9PSW9
    UniProtKB/TrEMBL
    A0A8V0XUE3
    Conserved Domains (1) summary
    smart00427
    Location:28124
    H2B; Histone H2B

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    48128472..48129293
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    48425255..48426075
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)