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HNF1B HNF1 homeobox B [ Gallus gallus (chicken) ]

Gene ID: 427838, updated on 10-Mar-2023

Summary

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Symbol
HNF1Bprovided by CGNC
Full Name
HNF1 homeobox Bprovided by CGNC
Primary source
CGNC:4099
See related
Ensembl:ENSGALG00010029161
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See HNF1B in Genome Data Viewer
Location:
chromosome: 19
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (9128560..9146468, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (8865540..8883519, complement)

Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene synergin gamma Neighboring gene DExD-box helicase 52 Neighboring gene HEAT repeat containing 6 Neighboring gene microRNA 6639 Neighboring gene dynein light chain LC8-type 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
hepatocyte nuclear factor 1-beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    9128560..9146468 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003642414.6 → XP_003642462.1  hepatocyte nuclear factor 1-beta isoform X2

    Conserved Domains (3) summary
    cd00086
    Location:204 → 277
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam04812
    Location:286 → 524
    HNF-1B_C; Hepatocyte nuclear factor 1 (HNF-1), beta isoform C-terminus
    pfam04814
    Location:8 → 172
    HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus

  2. XM_003642413.6 → XP_003642461.1  hepatocyte nuclear factor 1-beta isoform X1

    UniProtKB/TrEMBL
    A0A8V1AAZ9
    Related
    ENSGALP00010043154.1, ENSGALT00010070463.1
    Conserved Domains (3) summary
    cd00086
    Location:230 → 303
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam04812
    Location:312 → 550
    HNF-1B_C; Hepatocyte nuclear factor 1 (HNF-1), beta isoform C-terminus
    pfam04814
    Location:8 → 172
    HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    8865540..8883519 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040687653.2 → XP_040543587.1  hepatocyte nuclear factor 1-beta isoform X2

    Conserved Domains (3) summary
    cd00086
    Location:204 → 277
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam04812
    Location:286 → 524
    HNF-1B_C; Hepatocyte nuclear factor 1 (HNF-1), beta isoform C-terminus
    pfam04814
    Location:8 → 172
    HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus

  2. XM_040687652.2 → XP_040543586.1  hepatocyte nuclear factor 1-beta isoform X1

    UniProtKB/TrEMBL
    A0A8V1AAZ9
    Conserved Domains (3) summary
    cd00086
    Location:230 → 303
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    pfam04812
    Location:312 → 550
    HNF-1B_C; Hepatocyte nuclear factor 1 (HNF-1), beta isoform C-terminus
    pfam04814
    Location:8 → 172
    HNF-1_N; Hepatocyte nuclear factor 1 (HNF-1), N-terminus
Nucleotide Protein Strain
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