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MGAT5B alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B [ Gallus gallus (chicken) ]

Gene ID: 427801, updated on 3-Dec-2024
Official Symbol
MGAT5Bprovided by CGNC
Official Full Name
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase Bprovided by CGNC
Primary source
CGNC:1223
See related
Ensembl:ENSGALG00010029366
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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See MGAT5B in Genome Data Viewer
Location:
chromosome: 18
Exon count:
23
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (4786336..4845755, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (4390157..4449438, complement)

Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene SEC14 like lipid binding 1 Neighboring gene uncharacterized LOC112530017 Neighboring gene microRNA 6516 Neighboring gene endogenous retrovirus group K member 8 Gag polyprotein-like Neighboring gene uncharacterized LOC124417293 Neighboring gene major facilitator superfamily domain containing 11 Neighboring gene methyltransferase like 23 Neighboring gene serine and arginine rich splicing factor 2 Neighboring gene arginine demethylase and lysine hydroxylase

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B
Names
mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B
XP_015150769.1
XP_015150770.1
XP_015150771.1
XP_015150772.1
XP_015150773.1
XP_040505589.1
XP_040505590.1
XP_040505591.1
XP_040542115.1
XP_040542116.1
XP_040542117.1
XP_040542118.1
XP_040542119.1
XP_040542120.1
XP_040542121.1
XP_040542122.1
XP_046758072.1
XP_046758073.1
XP_046758074.1
XP_046758075.1
XP_046785705.1
XP_046785706.1
XP_046785707.1
XP_046785708.1

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4786336..4845755 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046902116.1 → XP_046758072.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X4

    UniProtKB/TrEMBL
    A0A8V1ALU8
    Related
    ENSGALP00010043707.1, ENSGALT00010071016.1

  2. XM_040649656.2 → XP_040505590.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X2

    UniProtKB/TrEMBL
    A0A8V1ALU8

  3. XM_040649655.2 → XP_040505589.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X1

    UniProtKB/TrEMBL
    A0A8V1ALU8

  4. XM_015295284.4 → XP_015150770.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X9

    UniProtKB/TrEMBL
    A0A8V1ALU8
    Related
    ENSGALP00010043706.1, ENSGALT00010071015.1
    Conserved Domains (1) summary
    pfam15024
    Location:182 → 778
    Glyco_transf_18; Glycosyltransferase family 18

  5. XM_015295283.4 → XP_015150769.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X3

    UniProtKB/TrEMBL
    A0A8V1AHT5, A0A8V1ALU8
    Conserved Domains (1) summary
    pfam15024
    Location:182 → 780
    Glyco_transf_18; Glycosyltransferase family 18

  6. XM_040649657.2 → XP_040505591.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X6

    UniProtKB/TrEMBL
    A0A8V1ALU8
    Conserved Domains (1) summary
    pfam15024
    Location:66 → 664
    Glyco_transf_18; Glycosyltransferase family 18

  7. XM_015295286.4 → XP_015150772.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X6

    UniProtKB/TrEMBL
    A0A8V1ALU8
    Conserved Domains (1) summary
    pfam15024
    Location:66 → 664
    Glyco_transf_18; Glycosyltransferase family 18

  8. XM_015295287.4 → XP_015150773.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X6

    UniProtKB/TrEMBL
    A0A8V1ALU8
    Conserved Domains (1) summary
    pfam15024
    Location:66 → 664
    Glyco_transf_18; Glycosyltransferase family 18

  9. XM_015295285.4 → XP_015150771.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X5

    UniProtKB/TrEMBL
    A0A8V1ALU8
    Conserved Domains (1) summary
    pfam15024
    Location:77 → 675
    Glyco_transf_18; Glycosyltransferase family 18

  10. XM_046902119.1 → XP_046758075.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X8

  11. XM_046902118.1 → XP_046758074.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X7

  12. XM_046902117.1 → XP_046758073.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X7

RNA

  1. XR_005840688.2 RNA Sequence

  2. XR_005840686.2 RNA Sequence

  3. XR_005840687.2 RNA Sequence

  4. XR_006931746.1 RNA Sequence

  5. XR_006931747.1 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4390157..4449438 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046929749.1 → XP_046785705.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X4

    UniProtKB/TrEMBL
    A0A8V1ALU8

  2. XM_040686182.2 → XP_040542116.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X2

    UniProtKB/TrEMBL
    A0A8V1ALU8

  3. XM_040686181.2 → XP_040542115.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X1

    UniProtKB/TrEMBL
    A0A8V1ALU8

  4. XM_040686188.2 → XP_040542122.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X9

    UniProtKB/TrEMBL
    A0A8V1ALU8
    Conserved Domains (1) summary
    pfam15024
    Location:182 → 778
    Glyco_transf_18; Glycosyltransferase family 18

  5. XM_040686183.2 → XP_040542117.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X3

    UniProtKB/TrEMBL
    A0A8V1AHT5, A0A8V1ALU8
    Conserved Domains (1) summary
    pfam15024
    Location:182 → 780
    Glyco_transf_18; Glycosyltransferase family 18

  6. XM_040686187.2 → XP_040542121.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X6

    UniProtKB/TrEMBL
    A0A8V1ALU8
    Conserved Domains (1) summary
    pfam15024
    Location:66 → 664
    Glyco_transf_18; Glycosyltransferase family 18

  7. XM_040686186.2 → XP_040542120.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X6

    UniProtKB/TrEMBL
    A0A8V1ALU8
    Conserved Domains (1) summary
    pfam15024
    Location:66 → 664
    Glyco_transf_18; Glycosyltransferase family 18

  8. XM_040686185.2 → XP_040542119.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X6

    UniProtKB/TrEMBL
    A0A8V1ALU8
    Conserved Domains (1) summary
    pfam15024
    Location:66 → 664
    Glyco_transf_18; Glycosyltransferase family 18

  9. XM_040686184.2 → XP_040542118.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X5

    UniProtKB/TrEMBL
    A0A8V1ALU8
    Conserved Domains (1) summary
    pfam15024
    Location:77 → 675
    Glyco_transf_18; Glycosyltransferase family 18

  10. XM_046929752.1 → XP_046785708.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X8

  11. XM_046929751.1 → XP_046785707.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X7

  12. XM_046929750.1 → XP_046785706.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X7

RNA

  1. XR_005854768.2 RNA Sequence

  2. XR_005854766.2 RNA Sequence

  3. XR_005854767.2 RNA Sequence

  4. XR_006936560.1 RNA Sequence

Nucleotide Protein
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