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GCNT3 glucosaminyl (N-acetyl) transferase 3, mucin type [ Gallus gallus (chicken) ]

Gene ID: 427492, updated on 17-Aug-2024
Symbol
GCNT3provided by CGNC
Full Name
glucosaminyl (N-acetyl) transferase 3, mucin typeprovided by CGNC
Primary source
CGNC:14556
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Location:
chromosome: 10
Exon count:
1
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 10 NC_052541.1 (5423264..5425772, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 10 NC_052582.1 (5297478..5300093, complement)

Chromosome 10 - NC_052541.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124417126 Neighboring gene BCL2 interacting protein 2 Neighboring gene general transcription factor IIA subunit 2 Neighboring gene OTU deubiquitinase 7A Neighboring gene Kruppel like factor 13 Neighboring gene transient receptor potential cation channel subfamily M member 1 Neighboring gene uncharacterized LOC121113485

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3
XP_040536673.1
XP_425064.2

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052541.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5423264..5425772 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_425064.7 → XP_425064.2  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A8V1A1P7
    Conserved Domains (1) summary
    pfam02485
    Location:125 → 392
    Branch; Core-2/I-Branching enzyme

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052582.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5297478..5300093 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040680739.2 → XP_040536673.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3

    UniProtKB/TrEMBL
    A0A8V1A1P7
    Conserved Domains (1) summary
    cl27418
    Location:77 → 301
    Branch; Core-2/I-Branching enzyme
Nucleotide Protein
Heading Accession and Version

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