Format

Send to:

Choose Destination

cnc cap-n-collar [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42743, updated on 25-Sep-2021

Summary

Official Symbol
cncprovided by FlyBase
Official Full Name
cap-n-collarprovided by FlyBase
Primary source
FLYBASE:FBgn0262975
Locus tag
Dmel_CG43286
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
5134; anon-WO0153538.6; anon-WO0153538.7; BcDNA:RE05559; CG13826; CG17894; CG43286; CG4566; CG4578; Cnc; CnC; CNC; cnc-C; Cnc-C; cncC; CncC; cncC/Nrf2; CNC_DROME; DM12; Dmel\CG43286; dNrf2; l(3)03921; l(3)j5E7; nrf2; Nrf2; NRF2
Old locus tag
Dmel_CG13826; Dmel_CG17894
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See cnc in Genome Data Viewer
Location:
94E7-94E7; 3-78 cM
Exon count:
19
Annotation release Status Assembly Chr Location
Release 6.32 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (23185580..23226711, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (19011302..19052433, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Vacuolar H[+] ATPase AC39 subunit 2 Neighboring gene uncharacterized protein Neighboring gene Inwardly rectifying potassium channel 1 Neighboring gene uncharacterized protein Neighboring gene fuzzy onions Neighboring gene uncharacterized protein Neighboring gene Rad60

Genomic regions, transcripts, and products

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by FlyBase

Process Evidence Code Pubs
involved_in blastoderm segmentation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in dendrite morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in determination of adult lifespan IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in head development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in intestinal stem cell homeostasis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in oocyte dorsal/ventral axis specification IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in oocyte microtubule cytoskeleton polarization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in oocyte nucleus localization involved in oocyte dorsal/ventral axis specification IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in pharynx development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation of bicoid mRNA localization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of pole plasm oskar mRNA localization IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in response to endoplasmic reticulum stress IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in response to oxidative stress IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in polytene chromosome puff IDA
Inferred from Direct Assay
more info
PubMed 

General protein information

Preferred Names
cap-n-collar
Names
CG43286-PA
CG43286-PB
CG43286-PC
CG43286-PD
CG43286-PE
CG43286-PF
CG43286-PG
CG43286-PH
CG43286-PI
CG43286-PJ
CG43286-PK
CG43286-PL
CG43286-PM
CG43286-PN
CG43286-PO
CG43286-PP
Cap 'n' collar
Cap'n'collar
Cap'n'collar B
Cap-and-collar
Cap-n-colar
Cap-n-collar
cap and collar
cap n collar
cnc-PA
cnc-PB
cnc-PC
cnc-PD
cnc-PE
cnc-PF
cnc-PG
cnc-PH
cnc-PI
cnc-PJ
cnc-PK
cnc-PL
cnc-PM
cnc-PN
cnc-PO
cnc-PP
nuclear factor E2-related factor 2

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    23185580..23226711 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_170053.3NP_732833.1  cap-n-collar, isoform C [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_732833.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P20482
    UniProtKB/TrEMBL
    A0A0B4K6E1
    Related
    FBpp0297671, FBtr0306748
    Conserved Domains (1) summary
    cd14698
    Location:11921259
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
  2. NM_001275935.1NP_001262864.1  cap-n-collar, isoform O [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262864.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4KHP5
    Related
    FBpp0303398, FBtr0330372
    Conserved Domains (1) summary
    cd14698
    Location:11921259
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
  3. NM_001260331.1NP_001247260.1  cap-n-collar, isoform K [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001247260.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P20482
    UniProtKB/TrEMBL
    A0A0B4K6E1
    Related
    FBpp0297677, FBtr0306754
    Conserved Domains (1) summary
    cd14698
    Location:11921259
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
  4. NM_001260330.1NP_001247259.1  cap-n-collar, isoform J [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001247259.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P20482
    UniProtKB/TrEMBL
    A0A0B4K6E1
    Related
    FBpp0297676, FBtr0306753
    Conserved Domains (1) summary
    cd14698
    Location:11921259
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
  5. NM_170058.2NP_732838.2  cap-n-collar, isoform L [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_732838.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P20482
    Related
    FBpp0297678, FBtr0306755
    Conserved Domains (1) summary
    cd14698
    Location:855922
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
  6. NM_170054.4NP_732834.1  cap-n-collar, isoform B [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_732834.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P20482
    Related
    FBpp0297672, FBtr0306749
    Conserved Domains (1) summary
    cd14698
    Location:614681
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
  7. NM_001275936.1NP_001262865.1  cap-n-collar, isoform P [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001262865.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4KGT0
    Related
    FBpp0307561, FBtr0336455
    Conserved Domains (1) summary
    cd14698
    Location:520587
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
  8. NM_170059.3NP_732839.1  cap-n-collar, isoform G [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_732839.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P20482
    UniProtKB/TrEMBL
    A0A0B4K6G8
    Related
    FBpp0297673, FBtr0306750
    Conserved Domains (1) summary
    cd14698
    Location:342409
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
  9. NM_001260327.2NP_001247256.1  cap-n-collar, isoform F [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001247256.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P20482
    UniProtKB/TrEMBL
    A0A0B4K6G8
    Related
    FBpp0297667, FBtr0306744
    Conserved Domains (1) summary
    cd14698
    Location:342409
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
  10. NM_170057.2NP_732837.1  cap-n-collar, isoform E [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_732837.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P20482
    UniProtKB/TrEMBL
    A0A0B4K6G8
    Related
    FBpp0297668, FBtr0306745
    Conserved Domains (1) summary
    cd14698
    Location:342409
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
  11. NM_001260328.1NP_001247257.1  cap-n-collar, isoform H [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001247257.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P20482
    UniProtKB/TrEMBL
    A0A0B4K6G8
    Related
    FBpp0297674, FBtr0306751
    Conserved Domains (1) summary
    cd14698
    Location:342409
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
  12. NM_170056.2NP_732836.1  cap-n-collar, isoform D [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_732836.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P20482
    UniProtKB/TrEMBL
    A0A0B4K6G8
    Related
    FBpp0297669, FBtr0306746
    Conserved Domains (1) summary
    cd14698
    Location:342409
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
  13. NM_170055.2NP_732835.1  cap-n-collar, isoform A [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_732835.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P20482
    UniProtKB/TrEMBL
    A0A0B4K6G8
    Related
    FBpp0297670, FBtr0306747
    Conserved Domains (1) summary
    cd14698
    Location:342409
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
  14. NM_001260332.2NP_001247261.1  cap-n-collar, isoform M [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001247261.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4K6Z0
    Related
    FBpp0300546, FBtr0308226
    Conserved Domains (1) summary
    cd14698
    Location:9421009
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
  15. NM_001260333.2NP_001247262.1  cap-n-collar, isoform N [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001247262.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4K6Z0
    Related
    FBpp0300547, FBtr0308227
    Conserved Domains (1) summary
    cd14698
    Location:9421009
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
  16. NM_001260329.2NP_001247258.1  cap-n-collar, isoform I [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_001247258.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    A0A0B4K6Z0
    Related
    FBpp0297675, FBtr0306752
    Conserved Domains (1) summary
    cd14698
    Location:9421009
    bZIP_CNC; Basic leucine zipper (bZIP) domain of Cap'n'Collar (CNC) transcription factors: a DNA-binding and dimerization domain
Support Center