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GCNT1 glucosaminyl (N-acetyl) transferase 1 [ Gallus gallus (chicken) ]

Gene ID: 427260, updated on 17-Aug-2024
Symbol
GCNT1provided by CGNC
Full Name
glucosaminyl (N-acetyl) transferase 1provided by CGNC
Primary source
CGNC:11285
See related
Ensembl:ENSGALG00010015132
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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See GCNT1 in Genome Data Viewer
Location:
chromosome: Z
Exon count:
3
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (37969360..37982398)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (37969360..37982398)

Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101752170 Neighboring gene riboflavin kinase Neighboring gene prune homolog 2 Neighboring gene uncharacterized LOC121108623 Neighboring gene uncharacterized LOC121108624

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase
Names
glucosaminyl (N-acetyl) transferase 1, core 2 (beta-1,6-N-acetylglucosaminyltransferase)
XP_003643070.1
XP_004949232.1
XP_015135841.1
XP_046791750.1
XP_046791751.1
XP_046791752.1

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    37969360..37982398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004949175.5 → XP_004949232.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    See identical proteins and their annotated locations for XP_004949232.1

    UniProtKB/TrEMBL
    F1NU59
    Related
    ENSGALP00010021223.1, ENSGALT00010036463.1
    Conserved Domains (1) summary
    pfam02485
    Location:121 → 389
    Branch; Core-2/I-Branching enzyme

  2. XM_003643022.6 → XP_003643070.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    See identical proteins and their annotated locations for XP_003643070.1

    UniProtKB/TrEMBL
    F1NU59
    Related
    ENSGALP00010021228.1, ENSGALT00010036468.1
    Conserved Domains (1) summary
    pfam02485
    Location:121 → 389
    Branch; Core-2/I-Branching enzyme

  3. XM_015280355.4 → XP_015135841.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    F1NU59
    Related
    ENSGALP00010021215.1, ENSGALT00010036455.1
    Conserved Domains (1) summary
    pfam02485
    Location:121 → 389
    Branch; Core-2/I-Branching enzyme

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    37969360..37982398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046935795.1 → XP_046791751.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    F1NU59

  2. XM_046935794.1 → XP_046791750.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    F1NU59

  3. XM_046935796.1 → XP_046791752.1  beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    F1NU59
Nucleotide Protein
Heading Accession and Version

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