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H2BK1 H2B.K variant histone 1 [ Gallus gallus (chicken) ]

Gene ID: 426037, updated on 17-Aug-2024
Official Symbol
H2BK1provided by CGNC
Official Full Name
H2B.K variant histone 1provided by CGNC
Primary source
CGNC:52653
See related
Ensembl:ENSGALG00010024819
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human all
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See H2BK1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (163781..164814)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (163455..164488)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily F member 2 Neighboring gene uncharacterized LOC121109553 Neighboring gene ankyrin repeat and SOCS box containing 10 Neighboring gene gastrulation brain homeobox 1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
late histone H2B.L4
Names
histone H2B

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    163781..164814
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_423715.8 → XP_423715.4  late histone H2B.L4

    UniProtKB/TrEMBL
    A0A1D5PY49
    Related
    ENSGALP00010037344.1, ENSGALT00010060585.1
    Conserved Domains (1) summary
    cl23830
    Location:28 → 117
    H2B; Histone H2B

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    163455..164488
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040664694.2 → XP_040520628.1  late histone H2B.L4

    UniProtKB/TrEMBL
    A0A1D5PY49
    Conserved Domains (1) summary
    cl23830
    Location:28 → 117
    H2B; Histone H2B
Nucleotide Protein
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