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CG6015 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42593, updated on 9-Apr-2017
Official Symbol
CG6015provided by FlyBase
Primary source
FLYBASE:FBgn0038927
Locus tag
Dmel_CG6015
Gene type
protein coding
RNA name
CG6015
RefSeq status
REVIEWED
Organism
Drosophila melanogaster (old-lineage: Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora)
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CDC40; Dmel\CG6015; prp17
Location:
94A1-94A1
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.13 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (22032150..22034286, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (17857872..17860008, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene NADH dehydrogenase (ubiquinone) 42 kDa subunit Neighboring gene CG13409 gene product from transcript CG13409-RA Neighboring gene CG45099 gene product from transcript CG45099-RA Neighboring gene pitchoune Neighboring gene Fas-associated death domain Neighboring gene small Cajal body-specific RNA : MeU5-G38

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
RNA binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
mRNA splicing, via spliceosome IC
Inferred by Curator
more info
PubMed 
mRNA splicing, via spliceosome ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
catalytic step 2 spliceosome IDA
Inferred from Direct Assay
more info
PubMed 
precatalytic spliceosome IDA
Inferred from Direct Assay
more info
PubMed 
spliceosomal complex ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Preferred Names
CG6015 gene product from transcript CG6015-RA
Names
CG6015
CG6015-PA

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    22032150..22034286 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_142748.5NP_651005.1  CG6015 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_651005.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VD52
    Related
    FBpp0083581, FBtr0084183
    Conserved Domains (3) summary
    COG2319
    Location:274576
    WD40; WD40 repeat [General function prediction only]
    cd00200
    Location:277576
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:289327
    7WD40; WD40 repeat [structural motif]
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