U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ARID4B AT-rich interaction domain 4B [ Gallus gallus (chicken) ]

Gene ID: 425840, updated on 3-Dec-2024
Symbol
ARID4Bprovided by CGNC
Full Name
AT-rich interaction domain 4Bprovided by CGNC
Primary source
CGNC:52595
See related
Ensembl:ENSGALG00010009482
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table
See ARID4B in Genome Data Viewer
Location:
chromosome: 3
Exon count:
24
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (37783218..37868030)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (37687931..37772732)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene tubulin folding cofactor E Neighboring gene uncharacterized LOC112532059 Neighboring gene geranylgeranyl diphosphate synthase 1 Neighboring gene translation initiation factor IF-2-like Neighboring gene small nucleolar RNA SNORA14 Neighboring gene RNA binding motif protein 34 Neighboring gene translocase of outer mitochondrial membrane 20

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription cis-regulatory region binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
AT-rich interactive domain-containing protein 4B
Names
AT rich interactive domain 4B (RBP1-like)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    37783218..37868030
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003640986.6 → XP_003641034.4  AT-rich interactive domain-containing protein 4B isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y400, A0A8V0YAV5
    Related
    ENSGALP00010013065.1, ENSGALT00010022643.1
    Conserved Domains (4) summary
    smart00333
    Location:58 → 113
    TUDOR; Tudor domain
    PRK08581
    Location:997 → 1189
    PRK08581; amidase domain-containing protein
    cd16883
    Location:304 → 395
    ARID_ARID4B; ARID/BRIGHT DNA binding domain of AT-rich interactive domain-containing protein 4B (ARID4B) and similar proteins
    cl28914
    Location:573 → 630
    CD_CSD; CHROMO (CHRromatin Organization Modifier) domains and chromo shadow domains

  2. XM_004935477.5 → XP_004935534.4  AT-rich interactive domain-containing protein 4B isoform X2

    UniProtKB/TrEMBL
    A0A8V0YAV5
    Conserved Domains (4) summary
    smart00333
    Location:58 → 113
    TUDOR; Tudor domain
    PRK08581
    Location:987 → 1179
    PRK08581; amidase domain-containing protein
    cd16883
    Location:294 → 385
    ARID_ARID4B; ARID/BRIGHT DNA binding domain of AT-rich interactive domain-containing protein 4B (ARID4B) and similar proteins
    cl28914
    Location:563 → 620
    CD_CSD; CHROMO (CHRromatin Organization Modifier) domains and chromo shadow domains

  3. XM_046939486.1 → XP_046795442.1  AT-rich interactive domain-containing protein 4B isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y400, A0A8V0YAV5

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    37687931..37772732
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040668505.2 → XP_040524439.1  AT-rich interactive domain-containing protein 4B isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y400, A0A8V0YAV5
    Conserved Domains (4) summary
    smart00333
    Location:58 → 113
    TUDOR; Tudor domain
    PRK08581
    Location:997 → 1189
    PRK08581; amidase domain-containing protein
    cd16883
    Location:304 → 395
    ARID_ARID4B; ARID/BRIGHT DNA binding domain of AT-rich interactive domain-containing protein 4B (ARID4B) and similar proteins
    cl28914
    Location:573 → 630
    CD_CSD; CHROMO (CHRromatin Organization Modifier) domains and chromo shadow domains

  2. XM_040668506.2 → XP_040524440.1  AT-rich interactive domain-containing protein 4B isoform X2

    UniProtKB/TrEMBL
    A0A8V0YAV5
    Conserved Domains (4) summary
    smart00333
    Location:58 → 113
    TUDOR; Tudor domain
    PRK08581
    Location:987 → 1179
    PRK08581; amidase domain-containing protein
    cd16883
    Location:294 → 385
    ARID_ARID4B; ARID/BRIGHT DNA binding domain of AT-rich interactive domain-containing protein 4B (ARID4B) and similar proteins
    cl28914
    Location:563 → 620
    CD_CSD; CHROMO (CHRromatin Organization Modifier) domains and chromo shadow domains

  3. XM_046914884.1 → XP_046770840.1  AT-rich interactive domain-containing protein 4B isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y400, A0A8V0YAV5
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials