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lsn larsen [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42572, updated on 26-Aug-2021

Summary

Official Symbol
lsnprovided by FlyBase
Official Full Name
larsenprovided by FlyBase
Primary source
FLYBASE:FBgn0260940
Locus tag
Dmel_CG6637
Gene type
protein coding
RNA name
larsen
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG6637; Dmel\CG6637; Lsn; vps22; Vps22
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Genomic context

See lsn in Genome Data Viewer
Location:
93F14-93F14; 3-73 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.32 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (21865168..21866238)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (17690890..17691960)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene long non-coding RNA:CR45644 Neighboring gene long non-coding RNA:CR45645 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Chibby Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

  • Homologs of the lsn gene: The lsn gene is conserved in human, chimpanzee, dog, cow, mouse, rat, chicken, zebrafish, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs

General protein information

Preferred Names
larsen
Names
CG6637-PA
lsn-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    21865168..21866238
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_142730.3NP_650987.1  larsen [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650987.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VD72
    Related
    FBpp0083533, FBtr0084135
    Conserved Domains (1) summary
    pfam04157
    Location:6228
    EAP30; EAP30/Vps36 family
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