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COLGALT2 collagen beta(1-O)galactosyltransferase 2 [ Gallus gallus (chicken) ]

Gene ID: 424447, updated on 17-Aug-2024
Official Symbol
COLGALT2provided by CGNC
Official Full Name
collagen beta(1-O)galactosyltransferase 2provided by CGNC
Primary source
CGNC:3543
See related
Ensembl:ENSGALG00010011588
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
GLT25D2; COLGALT1
Orthologs
human mouse all
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See COLGALT2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
12
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 8 NC_052539.1 (7729588..7763278, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 8 NC_052580.1 (7741073..7774773, complement)

Chromosome 8 - NC_052539.1Genomic Context describing neighboring genes Neighboring gene apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 Neighboring gene ral guanine nucleotide dissociation stimulator like 1 Neighboring gene uncharacterized LOC107053945 Neighboring gene tRNA splicing endonuclease subunit 15 Neighboring gene C1orf21 homolog

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables procollagen galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
procollagen galactosyltransferase 2
Names
collagen beta(1-O)galactosyltransferase 1
glycosyltransferase 25 domain containing 2
XP_040533475.1
XP_422290.3

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052539.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7729588..7763278 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_422290.6 → XP_422290.3  procollagen galactosyltransferase 2

    UniProtKB/TrEMBL
    A0A8V0Y5H9
    Related
    ENSGALP00010015891.1, ENSGALT00010027725.1
    Conserved Domains (2) summary
    cd00761
    Location:60 → 233
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    cl01298
    Location:342 → 527
    Glyco_transf_25; Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052580.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7741073..7774773 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040677541.2 → XP_040533475.1  procollagen galactosyltransferase 2

    UniProtKB/TrEMBL
    A0A8V0Y5H9
    Conserved Domains (2) summary
    cd00761
    Location:60 → 233
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    cl01298
    Location:342 → 527
    Glyco_transf_25; Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of ...
Nucleotide Protein Strain
Heading Accession and Version

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