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GALNT5 polypeptide N-acetylgalactosaminyltransferase 5 [ Gallus gallus (chicken) ]

Gene ID: 424324, updated on 17-Aug-2024
Symbol
GALNT5provided by CGNC
Full Name
polypeptide N-acetylgalactosaminyltransferase 5provided by CGNC
Primary source
CGNC:9522
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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See GALNT5 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 7 NC_052538.1 (35810960..35819714)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 7 NC_052579.1 (35730435..35739193)

Chromosome 7 - NC_052538.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107053901 Neighboring gene glycerol-3-phosphate dehydrogenase 2 Neighboring gene uncharacterized LOC101749716 Neighboring gene uncharacterized LOC121111250 Neighboring gene ermin

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
polypeptide N-acetylgalactosaminyltransferase 5
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 5 (GalNAc-T5)
XP_025008269.1
XP_040531842.1
XP_040531843.1
XP_422169.6

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052538.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    35810960..35819714
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025152501.3 → XP_025008269.1  polypeptide N-acetylgalactosaminyltransferase 5 isoform X2

    Conserved Domains (2) summary
    cd02510
    Location:94 → 395
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:405 → 526
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_422169.8 → XP_422169.6  polypeptide N-acetylgalactosaminyltransferase 5 isoform X1

    Conserved Domains (3) summary
    cd02510
    Location:391 → 692
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    smart00458
    Location:707 → 778
    RICIN; Ricin-type beta-trefoil
    PRK07764
    Location:94 → 226
    PRK07764; DNA polymerase III subunits gamma and tau; Validated

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052579.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    35730435..35739193
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040675909.2 → XP_040531843.1  polypeptide N-acetylgalactosaminyltransferase 5 isoform X2

    Conserved Domains (2) summary
    cd02510
    Location:94 → 395
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:405 → 526
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  2. XM_040675908.2 → XP_040531842.1  polypeptide N-acetylgalactosaminyltransferase 5 isoform X1

    Conserved Domains (3) summary
    cd02510
    Location:391 → 692
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    smart00458
    Location:707 → 778
    RICIN; Ricin-type beta-trefoil
    PRK07764
    Location:94 → 226
    PRK07764; DNA polymerase III subunits gamma and tau; Validated
Nucleotide Protein
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