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Rh3 Rhodopsin 3 [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42398, updated on 9-May-2019

Summary

Official Symbol
Rh3provided by FlyBase
Official Full Name
Rhodopsin 3provided by FlyBase
Primary source
FLYBASE:FBgn0003249
Locus tag
Dmel_CG10888
Gene type
protein coding
RNA name
rhodopsin 3
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Holometabola; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
CG10888; Dm Rh3; DMELRH3; Dmel\CG10888; Rh; rh3; RH3

Genomic context

See Rh3 in Genome Data Viewer
Location:
92C5-92C5; 3-67 cM
Exon count:
1
Annotation release Status Assembly Chr Location
Release 6.26 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (20081060..20082450, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (15906782..15908172, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene I'm not dead yet 2 Neighboring gene uncharacterized protein Neighboring gene midlife crisis Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

Pathways from BioSystems

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
G protein-coupled photoreceptor activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
G protein-coupled photoreceptor activity IDA
Inferred from Direct Assay
more info
PubMed 
G protein-coupled photoreceptor activity ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
G protein-coupled photoreceptor activity NAS
Non-traceable Author Statement
more info
PubMed 
G protein-coupled photoreceptor activity TAS
Traceable Author Statement
more info
PubMed 
Process Evidence Code Pubs
G protein-coupled receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
G protein-coupled receptor signaling pathway ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
absorption of UV light IMP
Inferred from Mutant Phenotype
more info
PubMed 
cellular response to light stimulus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
detection of UV TAS
Traceable Author Statement
more info
PubMed 
phototransduction IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
phototransduction NAS
Non-traceable Author Statement
more info
PubMed 
phototransduction, UV IDA
Inferred from Direct Assay
more info
PubMed 
phototransduction, UV NAS
Non-traceable Author Statement
more info
PubMed 
phototransduction, UV TAS
Traceable Author Statement
more info
PubMed 
visual perception IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
integral component of plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
rhodopsin 3
Names
CG10888-PA
Rh3-PA
Rhodopsin3
rhodopsin

NCBI Reference Sequences (RefSeq)

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    20081060..20082450 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_079687.3NP_524411.1  rhodopsin 3 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_524411.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    P04950
    Related
    FBpp0083284, FBtr0083876
    Conserved Domains (2) summary
    pfam00001
    Location:75338
    7tm_1; 7 transmembrane receptor (rhodopsin family)
    cl21561
    Location:66191
    7tm_4; Olfactory receptor
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