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CSGALNACT2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 [ Gallus gallus (chicken) ]

Gene ID: 423632, updated on 26-Mar-2025
Symbol
CSGALNACT2provided by CGNC
Full Name
chondroitin sulfate N-acetylgalactosaminyltransferase 2provided by CGNC
Primary source
CGNC:52010
See related
Ensembl:ENSGALG00010011094
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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See CSGALNACT2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
10
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 6 NC_052537.1 (5441170..5471589, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 6 NC_052578.1 (5327597..5358293, complement)

Chromosome 6 - NC_052537.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101752332 Neighboring gene RasGEF domain family member 1A Neighboring gene microRNA mir-12280 Neighboring gene ret proto-oncogene Neighboring gene uncharacterized LOC121111190 Neighboring gene BMS1, ribosome biogenesis factor

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Chondroitin sulfate N-acetylgalactosaminyltransferase-2 contributes to the replication of infectious bursal disease virus via interaction with the capsid protein VP2. Zhang L, et al. Viruses, 2015 Mar 23. PMID 25807054, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Taken together, we concluded that CSGalNAcT2, located in the Golgi apparatus, contributed to the replication of IBDV via interaction with VP2.
    Title: Chondroitin sulfate N-acetylgalactosaminyltransferase-2 contributes to the replication of infectious bursal disease virus via interaction with the capsid protein VP2.
Submit: New GeneRIF Correction

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
chondroitin sulfate N-acetylgalactosaminyltransferase 2
XP_015143534.1
XP_040530914.1
XP_040530915.1
XP_040530916.1
XP_040558881.1
XP_040558882.1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052537.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    5441170..5471589 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015288048.4 → XP_015143534.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    E1C2T4
    Conserved Domains (1) summary
    cl11394
    Location:77 → 514
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_040702948.2 → XP_040558882.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    E1C2T4
    Related
    ENSGALP00010015124.1, ENSGALT00010026549.1
    Conserved Domains (1) summary
    cl11394
    Location:77 → 514
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_040702947.2 → XP_040558881.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    E1C2T4
    Conserved Domains (1) summary
    cl11394
    Location:77 → 514
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052578.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    5327597..5358293 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040674980.2 → XP_040530914.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    E1C2T4
    Conserved Domains (1) summary
    cl11394
    Location:77 → 514
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  2. XM_040674982.2 → XP_040530916.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    E1C2T4
    Conserved Domains (1) summary
    cl11394
    Location:77 → 514
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

  3. XM_040674981.2 → XP_040530915.1  chondroitin sulfate N-acetylgalactosaminyltransferase 2

    UniProtKB/TrEMBL
    E1C2T4
    Conserved Domains (1) summary
    cl11394
    Location:77 → 514
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
Nucleotide Protein
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