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WDHD1 WD repeat and HMG-box DNA binding protein 1 [ Gallus gallus (chicken) ]

Gene ID: 423558, updated on 13-Apr-2026
Symbol
WDHD1provided by CGNC
Full Name
WD repeat and HMG-box DNA binding protein 1provided by CGNC
Primary source
CGNC:9261
See related
Ensembl:ENSGALG00010018780
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
all
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See WDHD1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
26
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (55901922..55932563)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (55943180..55973819)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase 1 interacting protein 1-like Neighboring gene suppressor of cytokine signaling 4 Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene GTP cyclohydrolase 1 Neighboring gene sterile alpha motif domain containing 4A Neighboring gene microRNA 1676

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA-templated DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nuclear replication fork IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
WD repeat and HMG-box DNA-binding protein 1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    55901922..55932563
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040702049.2 → XP_040557983.1  WD repeat and HMG-box DNA-binding protein 1

    UniProtKB/TrEMBL
    A0A1D5PDL4, A0A8V0ZEU8
    Conserved Domains (5) summary
    COG5648
    Location:951 → 1105
    NHP6B; Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]
    cd00084
    Location:1011 → 1077
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    cd00200
    Location:10 → 289
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:17 → 54
    7WD40; WD40 repeat [structural motif]
    pfam12341
    Location:425 → 708
    Mcl1_mid; Minichromosome loss protein, Mcl1, middle region

  2. XM_015287925.4 → XP_015143411.1  WD repeat and HMG-box DNA-binding protein 1

    UniProtKB/TrEMBL
    A0A1D5PDL4, A0A8V0ZEU8
    Related
    ENSGALP00010027087.1, ENSGALT00010045379.1
    Conserved Domains (5) summary
    COG5648
    Location:951 → 1105
    NHP6B; Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]
    cd00084
    Location:1011 → 1077
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    cd00200
    Location:10 → 289
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:17 → 54
    7WD40; WD40 repeat [structural motif]
    pfam12341
    Location:425 → 708
    Mcl1_mid; Minichromosome loss protein, Mcl1, middle region

  3. XM_421449.8 → XP_421449.4  WD repeat and HMG-box DNA-binding protein 1

    UniProtKB/TrEMBL
    A0A1D5PDL4, A0A8V0ZEU8
    Related
    ENSGALP00010027084.1, ENSGALT00010045372.1
    Conserved Domains (5) summary
    COG5648
    Location:951 → 1105
    NHP6B; Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]
    cd00084
    Location:1011 → 1077
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    cd00200
    Location:10 → 289
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:17 → 54
    7WD40; WD40 repeat [structural motif]
    pfam12341
    Location:425 → 708
    Mcl1_mid; Minichromosome loss protein, Mcl1, middle region

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    55943180..55973819
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040673873.2 → XP_040529807.1  WD repeat and HMG-box DNA-binding protein 1

    UniProtKB/TrEMBL
    A0A8V0ZEU8
    Conserved Domains (4) summary
    COG5648
    Location:951 → 1105
    NHP6B; Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]
    cd00084
    Location:1011 → 1077
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    cd00200
    Location:10 → 289
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:17 → 54
    7WD40; WD40 repeat [structural motif]

  2. XM_040673872.2 → XP_040529806.1  WD repeat and HMG-box DNA-binding protein 1

    UniProtKB/TrEMBL
    A0A8V0ZEU8
    Conserved Domains (4) summary
    COG5648
    Location:951 → 1105
    NHP6B; Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]
    cd00084
    Location:1011 → 1077
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    cd00200
    Location:10 → 289
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:17 → 54
    7WD40; WD40 repeat [structural motif]

  3. XM_040673871.2 → XP_040529805.1  WD repeat and HMG-box DNA-binding protein 1

    UniProtKB/TrEMBL
    A0A8V0ZEU8
    Conserved Domains (4) summary
    COG5648
    Location:951 → 1105
    NHP6B; Chromatin-associated proteins containing the HMG domain [Chromatin structure and dynamics]
    cd00084
    Location:1011 → 1077
    HMG-box; High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I ...
    cd00200
    Location:10 → 289
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    sd00039
    Location:17 → 54
    7WD40; WD40 repeat [structural motif]
Nucleotide Protein
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