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LGMN legumain [ Gallus gallus (chicken) ]

Gene ID: 423418, updated on 3-Dec-2024
Symbol
LGMNprovided by CGNC
Full Name
legumainprovided by CGNC
Primary source
CGNC:8216
See related
Ensembl:ENSGALG00010015472
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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See LGMN in Genome Data Viewer
Location:
chromosome: 5
Exon count:
20
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (44320840..44354568, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (44290619..44324430, complement)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 24 member 4 Neighboring gene Ras and Rab interactor 3 Neighboring gene uncharacterized LOC121110932 Neighboring gene golgin A5 Neighboring gene uncharacterized LOC121110933

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proteolysis involved in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vacuolar protein processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
legumain
XP_015143240.2
XP_025006619.2
XP_025006621.2
XP_025006622.2
XP_040528949.1
XP_040528950.1
XP_040528951.1
XP_040528952.1
XP_040528953.1
XP_040528954.1
XP_040528955.1
XP_040528957.1
XP_040557516.1
XP_040557518.1
XP_046775375.1
XP_046775377.1
XP_046775378.1
XP_046775379.1
XP_046775380.1
XP_046775381.1
XP_046775382.1
XP_046775383.1
XP_046775384.1
XP_046798379.1
XP_046798380.1
XP_046798381.1
XP_046798382.1
XP_046798383.1
XP_046798384.1
XP_046798385.1
XP_046798386.1
XP_046798387.1
XP_046798388.1
XP_046798389.1
XP_046798390.1
XP_046798391.1
XP_421328.2

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    44320840..44354568 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046942424.1 → XP_046798380.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  2. XM_040701582.2 → XP_040557516.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2
    Conserved Domains (1) summary
    cl00042
    Location:29 → 224
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  3. XM_025150853.3 → XP_025006621.2  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2
    Conserved Domains (1) summary
    cl00042
    Location:29 → 224
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  4. XM_046942435.1 → XP_046798391.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  5. XM_046942434.1 → XP_046798390.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  6. XM_046942430.1 → XP_046798386.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  7. XM_046942426.1 → XP_046798382.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  8. XM_046942431.1 → XP_046798387.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  9. XM_046942433.1 → XP_046798389.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  10. XM_046942429.1 → XP_046798385.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  11. XM_046942432.1 → XP_046798388.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  12. XM_046942427.1 → XP_046798383.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  13. XM_046942425.1 → XP_046798381.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  14. XM_046942428.1 → XP_046798384.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  15. XM_421328.8 → XP_421328.2  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2
    Related
    ENSGALP00010021564.1, ENSGALT00010037130.1
    Conserved Domains (1) summary
    cl00042
    Location:29 → 224
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  16. XM_025150851.3 → XP_025006619.2  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2
    Conserved Domains (1) summary
    cl00042
    Location:29 → 224
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  17. XM_015287754.4 → XP_015143240.2  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2
    Conserved Domains (1) summary
    cl00042
    Location:29 → 224
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  18. XM_025150854.3 → XP_025006622.2  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2
    Conserved Domains (1) summary
    cl00042
    Location:29 → 224
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  19. XM_046942423.1 → XP_046798379.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  20. XM_040701584.2 → XP_040557518.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2
    Conserved Domains (1) summary
    cl00042
    Location:29 → 224
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    44290619..44324430 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046919421.1 → XP_046775377.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  2. XM_040673019.2 → XP_040528953.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2
    Conserved Domains (1) summary
    cl00042
    Location:29 → 224
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  3. XM_040673018.2 → XP_040528952.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2
    Conserved Domains (1) summary
    cl00042
    Location:29 → 224
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  4. XM_046919428.1 → XP_046775384.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  5. XM_046919425.1 → XP_046775381.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  6. XM_046919427.1 → XP_046775383.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  7. XM_046919423.1 → XP_046775379.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  8. XM_046919426.1 → XP_046775382.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  9. XM_046919422.1 → XP_046775378.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  10. XM_046919424.1 → XP_046775380.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  11. XM_040673015.2 → XP_040528949.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2
    Conserved Domains (1) summary
    cl00042
    Location:29 → 224
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  12. XM_040673017.2 → XP_040528951.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2
    Conserved Domains (1) summary
    cl00042
    Location:29 → 224
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  13. XM_040673016.2 → XP_040528950.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2
    Conserved Domains (1) summary
    cl00042
    Location:29 → 224
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  14. XM_040673020.2 → XP_040528954.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2
    Conserved Domains (1) summary
    cl00042
    Location:29 → 224
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  15. XM_046919419.1 → XP_046775375.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2

  16. XM_040673021.2 → XP_040528955.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2
    Conserved Domains (1) summary
    cl00042
    Location:29 → 224
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...

  17. XM_040673023.1 → XP_040528957.1  legumain

    UniProtKB/TrEMBL
    A0A8V0YSF6, A0A8V0YYY2
    Conserved Domains (1) summary
    cl00042
    Location:29 → 224
    CASc; Caspase, interleukin-1 beta converting enzyme (ICE) homologues; Cysteine-dependent aspartate-directed proteases that mediate programmed cell death (apoptosis). Caspases are synthesized as inactive zymogens and activated by proteolysis of the peptide ...
Nucleotide Protein
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