U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

PRKD1 protein kinase D1 [ Gallus gallus (chicken) ]

Gene ID: 423302, updated on 19-May-2023

Summary

Symbol
PRKD1provided by CGNC
Full Name
protein kinase D1provided by CGNC
Primary source
CGNC:51946
See related
Ensembl:ENSGALG00010005458
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See PRKD1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
20
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (33326802..33441456, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (33303370..33418085, complement)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC423301 Neighboring gene uncharacterized LOC124418023 Neighboring gene uncharacterized LOC101747910 Neighboring gene uncharacterized LOC107053509 Neighboring gene G2/M-phase specific E3 ubiquitin protein ligase

Genomic regions, transcripts, and products

Pathways from PubChem

General protein information

Preferred Names
serine/threonine-protein kinase D1
NP_001026372.1
NP_001384132.1
NP_001384133.1
NP_001384134.1
XP_015142845.1
XP_046774492.1

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031201.2NP_001026372.1  serine/threonine-protein kinase D1 isoform 3

    See identical proteins and their annotated locations for NP_001026372.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000215
    UniProtKB/TrEMBL
    Q5F3M9
    Related
    ENSGALP00010007583.1, ENSGALT00010013021.1
    Conserved Domains (5) summary
    smart00220
    Location:566790
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd00029
    Location:250299
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd01239
    Location:395522
    PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
    cd14082
    Location:558790
    STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D
    pfam00130
    Location:126175
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)
  2. NM_001397203.1NP_001384132.1  serine/threonine-protein kinase D1 isoform 1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000215
    Related
    ENSGALP00010007589.1, ENSGALT00010013027.1
    Conserved Domains (4) summary
    cd01239
    Location:403530
    PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
    cd14082
    Location:566825
    STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D
    cd20839
    Location:119190
    C1_PKD1_rpt1; first protein kinase C conserved region 1 (C1 domain) found in protein kinase D (PKD) and similar proteins
    cd20842
    Location:224317
    C1_PKD1_rpt2; second protein kinase C conserved region 1 (C1 domain) found in protein kinase D (PKD) and similar proteins
  3. NM_001397204.1NP_001384133.1  serine/threonine-protein kinase D1 isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000215
    Related
    ENSGALP00010007591.1, ENSGALT00010013029.1
    Conserved Domains (4) summary
    cd01239
    Location:395522
    PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
    cd14082
    Location:558817
    STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D
    cd20839
    Location:119190
    C1_PKD1_rpt1; first protein kinase C conserved region 1 (C1 domain) found in protein kinase D (PKD) and similar proteins
    cd20842
    Location:216309
    C1_PKD1_rpt2; second protein kinase C conserved region 1 (C1 domain) found in protein kinase D (PKD) and similar proteins
  4. NM_001397205.1NP_001384134.1  serine/threonine-protein kinase D1 isoform 4

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000215
    Conserved Domains (3) summary
    smart00109
    Location:175224
    C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
    cd01239
    Location:320447
    PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
    cd14082
    Location:483742
    STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    33326802..33441456 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015287359.4XP_015142845.1  serine/threonine-protein kinase D1 isoform X1

    Conserved Domains (5) summary
    smart00220
    Location:499751
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd00029
    Location:183232
    C1; Protein kinase C conserved region 1 (C1) . Cysteine-rich zinc binding domain. Some members of this domain family bind phorbol esters and diacylglycerol, some are reported to bind RasGTP. May occur in tandem arrangement. Diacylglycerol (DAG) is a second ...
    cd01239
    Location:328455
    PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
    cd14082
    Location:491750
    STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D
    pfam00130
    Location:51100
    C1_1; Phorbol esters/diacylglycerol binding domain (C1 domain)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    33303370..33418085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046918536.1XP_046774492.1  serine/threonine-protein kinase D1 isoform X1