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GALNT18 polypeptide N-acetylgalactosaminyltransferase 18 [ Gallus gallus (chicken) ]

Gene ID: 423034, updated on 3-Dec-2024
Symbol
GALNT18provided by CGNC
Full Name
polypeptide N-acetylgalactosaminyltransferase 18provided by CGNC
Primary source
CGNC:4159
See related
Ensembl:ENSGALG00010022205
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
GALNTL4
Orthologs
human mouse all
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See GALNT18 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
18
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (7892722..8190991)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (7859930..8159474)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 2 Neighboring gene dickkopf WNT signaling pathway inhibitor 3 Neighboring gene ubiquitin specific peptidase 47 Neighboring gene uncharacterized LOC100859067 Neighboring gene uncharacterized LOC107053374 Neighboring gene small nucleolar RNA SNORD97 Neighboring gene eukaryotic translation initiation factor 4 gamma 2 Neighboring gene CTR9 homolog, Paf1/RNA polymerase II complex component

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
polypeptide N-acetylgalactosaminyltransferase 18
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 18
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase-like 4
putative polypeptide N-acetylgalactosaminyltransferase-like protein 4
NP_001186513.2
XP_040556755.1
XP_046774097.1
XP_046774098.1
XP_046774099.1
XP_046774100.1
XP_046774101.1
XP_046774102.1
XP_046774103.1
XP_046774104.1
XP_046774105.1
XP_046774106.1
XP_046774107.1
XP_046774108.1
XP_046774109.1
XP_046797558.1
XP_046797559.1
XP_046797560.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001199584.2 → NP_001186513.2  polypeptide N-acetylgalactosaminyltransferase 18

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000214
    UniProtKB/TrEMBL
    A0A8V0ZGX7, A0A8V0ZP28
    Related
    ENSGALP00010032563.1, ENSGALT00010054032.1
    Conserved Domains (2) summary
    cd02510
    Location:157 → 458
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:471 → 598
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    7892722..8190991
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046941603.1 → XP_046797559.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP19

  2. XM_046941602.1 → XP_046797558.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP19

  3. XM_046941604.1 → XP_046797560.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP19

  4. XM_040700821.2 → XP_040556755.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZP19
    Related
    ENSGALP00010032557.1, ENSGALT00010054026.1
    Conserved Domains (2) summary
    cd02510
    Location:157 → 458
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    cd00161
    Location:471 → 559
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    7859930..8159474
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046918151.1 → XP_046774107.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZP28

  2. XM_046918145.1 → XP_046774101.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP19

  3. XM_046918142.1 → XP_046774098.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP19

  4. XM_046918144.1 → XP_046774100.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP19

  5. XM_046918153.1 → XP_046774109.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZP28

  6. XM_046918146.1 → XP_046774102.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP19

  7. XM_046918149.1 → XP_046774105.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZP28

  8. XM_046918152.1 → XP_046774108.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZP28

  9. XM_046918150.1 → XP_046774106.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZP28

  10. XM_046918143.1 → XP_046774099.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP19

  11. XM_046918141.1 → XP_046774097.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X1

    UniProtKB/TrEMBL
    A0A8V0ZP19

  12. XM_046918147.1 → XP_046774103.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X2

    UniProtKB/TrEMBL
    A0A8V0ZP19

  13. XM_046918148.1 → XP_046774104.1  polypeptide N-acetylgalactosaminyltransferase 18 isoform X3

    UniProtKB/TrEMBL
    A0A8V0ZP28
Nucleotide Protein Strain
Heading Accession and Version

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