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HELQ helicase, POLQ-like [ Gallus gallus (chicken) ]

Gene ID: 422606, updated on 17-Aug-2024
Symbol
HELQprovided by CGNC
Full Name
helicase, POLQ-likeprovided by CGNC
Primary source
CGNC:51785
See related
Ensembl:ENSGALG00010002576
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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See HELQ in Genome Data Viewer
Location:
chromosome: 4
Exon count:
19
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (46027150..46043577, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (45967163..45983584, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene coenzyme Q2, polyprenyltransferase Neighboring gene heparanase Neighboring gene mitochondrial ribosomal protein S18C Neighboring gene family with sequence similarity 175 member A Neighboring gene 1-acylglycerol-3-phosphate O-acyltransferase 5 like Neighboring gene glycerol-3-phosphate acyltransferase 3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
helicase POLQ-like
XP_015131960.2
XP_015131961.2
XP_040525202.1
XP_040525203.1
XP_040525204.1
XP_040525205.1
XP_040555071.1
XP_420565.2

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    46027150..46043577 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040699137.2 → XP_040555071.1  helicase POLQ-like isoform X2

    UniProtKB/TrEMBL
    A0A8V0X6F5
    Related
    ENSGALP00010003677.1, ENSGALT00010005910.1
    Conserved Domains (2) summary
    COG1204
    Location:279 → 1012
    BRR2; Replicative superfamily II helicase [Replication, recombination and repair]
    cd18026
    Location:279 → 481
    DEXHc_POLQ-like; DEXH-box helicase domain of DNA polymerase theta

  2. XM_420565.6 → XP_420565.2  helicase POLQ-like isoform X1

    UniProtKB/TrEMBL
    A0A8V0XG98
    Related
    ENSGALP00010003680.1, ENSGALT00010005914.1
    Conserved Domains (2) summary
    COG1204
    Location:279 → 1045
    BRR2; Replicative superfamily II helicase [Replication, recombination and repair]
    cd18026
    Location:279 → 481
    DEXHc_POLQ-like; DEXH-box helicase domain of DNA polymerase theta

  3. XM_015276474.4 → XP_015131960.2  helicase POLQ-like isoform X3

    Conserved Domains (2) summary
    PRK02362
    Location:50 → 662
    PRK02362; ATP-dependent DNA helicase
    TIGR03491
    Location:626 → 703
    TIGR03491; RecB family nuclease, putative, TM0106 family

  4. XM_015276475.2 → XP_015131961.2  helicase POLQ-like isoform X4

    Conserved Domains (1) summary
    PRK02362
    Location:47 → 561
    PRK02362; ATP-dependent DNA helicase

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    45967163..45983584 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040669269.2 → XP_040525203.1  helicase POLQ-like isoform X2

    Conserved Domains (2) summary
    COG1204
    Location:279 → 1012
    BRR2; Replicative superfamily II helicase [Replication, recombination and repair]
    cd18026
    Location:279 → 481
    DEXHc_POLQ-like; DEXH-box helicase domain of DNA polymerase theta

  2. XM_040669268.2 → XP_040525202.1  helicase POLQ-like isoform X1

    Conserved Domains (2) summary
    COG1204
    Location:279 → 1045
    BRR2; Replicative superfamily II helicase [Replication, recombination and repair]
    cd18026
    Location:279 → 481
    DEXHc_POLQ-like; DEXH-box helicase domain of DNA polymerase theta

  3. XM_040669270.2 → XP_040525204.1  helicase POLQ-like isoform X3

    Conserved Domains (2) summary
    PRK02362
    Location:50 → 662
    PRK02362; ATP-dependent DNA helicase
    TIGR03491
    Location:626 → 703
    TIGR03491; RecB family nuclease, putative, TM0106 family

  4. XM_040669271.1 → XP_040525205.1  helicase POLQ-like isoform X4

    Conserved Domains (1) summary
    PRK02362
    Location:47 → 561
    PRK02362; ATP-dependent DNA helicase
Nucleotide Protein Strain
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