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MIR664B microRNA 664b [ Gallus gallus (chicken) ]

Gene ID: 422196, updated on 26-Jun-2017
Symbol
MIR664Bprovided by CGNC
Full Name
microRNA 664bprovided by CGNC
Primary source
CGNC:3757
See related
Ensembl:ENSGALG00000005054
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
DKC1
Orthologs
Location:
chromosome: 4
Exon count:
15
Annotation release Status Assembly Chr Location
103 current Gallus_gallus-5.0 (GCF_000002315.4) 4 NC_006091.4 (2130910..2140083)
102 previous assembly Gallus_gallus-4.0 (GCF_000002315.3) 4 NC_006091.3 (2094842..2104015)

Chromosome 4 - NC_006091.4Genomic Context describing neighboring genes Neighboring gene tRNA (uracil-5-)-methyltransferase homolog Neighboring gene G-protein coupled receptor 34-like Neighboring gene coagulation factor VIII-associated 3 Neighboring gene membrane palmitoylated protein 1 Neighboring gene small integral membrane protein 9

  • Ribosome biogenesis in eukaryotes, organism-specific biosystem (from KEGG)
    Ribosome biogenesis in eukaryotes, organism-specific biosystemRibosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It...
  • Ribosome biogenesis in eukaryotes, conserved biosystem (from KEGG)
    Ribosome biogenesis in eukaryotes, conserved biosystemRibosomes are the cellular factories responsible for making proteins. In eukaryotes, ribosome biogenesis involves the production and correct assembly of four rRNAs and about 80 ribosomal proteins. It...

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
RNA binding IEA
Inferred from Electronic Annotation
more info
 
pseudouridine synthase activity IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
box H/ACA snoRNA 3'-end processing IBA
Inferred from Biological aspect of Ancestor
more info
 
mRNA pseudouridine synthesis IBA
Inferred from Biological aspect of Ancestor
more info
 
rRNA pseudouridine synthesis IBA
Inferred from Biological aspect of Ancestor
more info
 
snRNA pseudouridine synthesis IBA
Inferred from Biological aspect of Ancestor
more info
 
telomere maintenance via telomerase TAS
Traceable Author Statement
more info
 
Component Evidence Code Pubs
box H/ACA snoRNP complex IBA
Inferred from Biological aspect of Ancestor
more info
 
nucleoplasm TAS
Traceable Author Statement
more info
 
Preferred Names
H/ACA ribonucleoprotein complex subunit 4
Names
dyskeratosis congenita 1, dyskerin
dyskerin pseudouridine synthase 1

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001031115.1NP_001026286.1  H/ACA ribonucleoprotein complex subunit 4

    See identical proteins and their annotated locations for NP_001026286.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ720455
    UniProtKB/Swiss-Prot
    Q5ZJH9
    Related
    ENSGALP00000008091.4, ENSGALT00000008105.4
    Conserved Domains (4) summary
    cd02572
    Location:86268
    PseudoU_synth_hDyskerin; Pseudouridine synthase, human dyskerin like
    TIGR00425
    Location:54379
    CBF5; rRNA pseudouridine synthase, putative
    pfam01472
    Location:295368
    PUA; PUA domain
    pfam08068
    Location:47104
    DKCLD; DKCLD (NUC011) domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Gallus_gallus-5.0 Primary Assembly

Genomic

  1. NC_006091.4 Reference Gallus_gallus-5.0 Primary Assembly

    Range
    2130910..2140083
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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