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TSEN54 tRNA splicing endonuclease subunit 54 [ Gallus gallus (chicken) ]

Gene ID: 422126, updated on 13-Apr-2026
Symbol
TSEN54provided by CGNC
Full Name
tRNA splicing endonuclease subunit 54provided by CGNC
Primary source
CGNC:6085
See related
Ensembl:ENSGALG00010029725
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
all
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See TSEN54 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (11517234..11526174)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (11117721..11126660)

Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene growth factor receptor bound protein 2 Neighboring gene transmembrane protein 94 Neighboring gene CASK interacting protein 2 Neighboring gene melanin-concentrating hormone receptor 1 Neighboring gene LLGL2, scribble cell polarity complex component Neighboring gene uncharacterized LOC121107176 Neighboring gene uncharacterized LOC121107174

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in tRNA-type intron splice site recognition and cleavage IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of tRNA-intron endonuclease complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
tRNA-splicing endonuclease subunit Sen54
Names
TSEN54 tRNA splicing endonuclease subunit

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    11517234..11526174
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_420129.8 → XP_420129.3  tRNA-splicing endonuclease subunit Sen54

    UniProtKB/TrEMBL
    A0A8V1AEY4, A0A8V1ALX5
    Related
    ENSGALP00010044593.1, ENSGALT00010071903.1
    Conserved Domains (1) summary
    TIGR00324
    Location:93 → 149
    endA; tRNA-intron lyase

RNA

  1. XR_213375.5 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    11117721..11126660
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040686804.2 → XP_040542738.1  tRNA-splicing endonuclease subunit Sen54

    UniProtKB/TrEMBL
    A0A8V1AEY4, A0A8V1ALX5
    Conserved Domains (1) summary
    TIGR00324
    Location:93 → 149
    endA; tRNA-intron lyase

RNA

  1. XR_005854849.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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