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ELP3 elongator acetyltransferase complex subunit 3 [ Gallus gallus (chicken) ]

Gene ID: 422021, updated on 2-Oct-2018

Summary

Symbol
ELP3provided by CGNC
Full Name
elongator acetyltransferase complex subunit 3provided by CGNC
Primary source
CGNC:12458
See related
Ensembl:ENSGALG00000016624
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs

Genomic context

See ELP3 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
104 current GRCg6a (GCF_000002315.5) 3 NC_006090.5 (105709011..105792874, complement)
103 previous assembly Gallus_gallus-5.0 (GCF_000002315.4) 3 NC_006090.4 (106164712..106248576, complement)

Chromosome 3 - NC_006090.5Genomic Context describing neighboring genes Neighboring gene serine/threonine kinase 35-like Neighboring gene prepronociceptin Neighboring gene F-box protein 16 Neighboring gene frizzled class receptor 3

Genomic regions, transcripts, and products

General gene information

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
histone acetyltransferase activity IEA
Inferred from Electronic Annotation
more info
 
iron-sulfur cluster binding IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
phosphorylase kinase regulator activity ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
histone acetylation IEA
Inferred from Electronic Annotation
more info
 
regulation of protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
regulation of transcription by RNA polymerase II ISS
Inferred from Sequence or Structural Similarity
more info
 
tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
Elongator holoenzyme complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
cytoplasm ISS
Inferred from Sequence or Structural Similarity
more info
 
nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
transcription elongation factor complex ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
elongator complex protein 3
Names
elongation protein 3 homolog
NP_001034382.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001039293.1NP_001034382.1  elongator complex protein 3

    See identical proteins and their annotated locations for NP_001034382.1

    Status: PROVISIONAL

    Source sequence(s)
    AJ721063
    UniProtKB/Swiss-Prot
    Q5ZHS1
    Related
    ENSGALP00000026781.5, ENSGALT00000026832.5
    Conserved Domains (3) summary
    cd01335
    Location:95341
    Radical_SAM; Radical SAM superfamily. Enzymes of this family generate radicals by combining a 4Fe-4S cluster and S-adenosylmethionine (SAM) in close proximity. They are characterized by a conserved CxxxCxxC motif, which coordinates the conserved iron-sulfur cluster. ...
    TIGR01211
    Location:36545
    ELP3; radical SAM enzyme/protein acetyltransferase, ELP3 family
    pfam16199
    Location:313391
    Radical_SAM_C; Radical_SAM C-terminal domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCg6a Primary Assembly

Genomic

  1. NC_006090.5 Reference GRCg6a Primary Assembly

    Range
    105709011..105792874 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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