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PNOC prepronociceptin [ Gallus gallus (chicken) ]

Gene ID: 422019, updated on 17-Aug-2024
Symbol
PNOCprovided by CGNC
Full Name
prepronociceptinprovided by CGNC
Primary source
CGNC:12455
See related
Ensembl:ENSGALG00010010851
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
nociceptin
Orthologs
human mouse all
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See PNOC in Genome Data Viewer
Location:
chromosome: 3
Exon count:
4
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (105480369..105487485, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (105244043..105253185, complement)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC425623 Neighboring gene zinc finger protein 395 Neighboring gene serine/threonine kinase 35-like Neighboring gene uncharacterized LOC121110418

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Neuropeptides: developmental signals in placode progenitor formation. Lleras-Forero L, et al. Dev Cell, 2013 Jul 29. PMID 23906067, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables opioid receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuropeptide signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sensory perception IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon terminus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
prepronociceptin

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001185051.1 → NP_001171980.1  prepronociceptin precursor

    See identical proteins and their annotated locations for NP_001171980.1

    Status: PROVISIONAL

    Source sequence(s)
    HM165258
    UniProtKB/TrEMBL
    D7RXN8, E1BRK8
    Conserved Domains (1) summary
    pfam01160
    Location:20 → 59
    Opiods_neuropep; Vertebrate endogenous opioids neuropeptide

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    105480369..105487485 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040697232.2 → XP_040553166.1  prepronociceptin isoform X1

    UniProtKB/TrEMBL
    A0A8E7KPT0, A0A8V0Y6R7
    Related
    ENSGALP00010014638.1, ENSGALT00010025977.1

  2. XM_015285108.4 → XP_015140594.2  prepronociceptin isoform X2

    UniProtKB/TrEMBL
    E1BRK8

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    105244043..105253185 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046914249.1 → XP_046770205.1  prepronociceptin isoform X5

  2. XM_046914247.1 → XP_046770203.1  prepronociceptin isoform X3

  3. XM_046914248.1 → XP_046770204.1  prepronociceptin isoform X4

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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