U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ATP6V1C2 ATPase H+ transporting V1 subunit C2 [ Gallus gallus (chicken) ]

Gene ID: 421939, updated on 13-Apr-2026
Symbol
ATP6V1C2provided by CGNC
Full Name
ATPase H+ transporting V1 subunit C2provided by CGNC
Primary source
CGNC:12313
See related
Ensembl:ENSGALG00010002590
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
all
Try the new Gene page
Try the new Transcripts and proteins table
See ATP6V1C2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
15
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (96602062..96618845)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (96416407..96433187)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110478 Neighboring gene nucleolar protein 10 Neighboring gene microRNA 1329 Neighboring gene uncharacterized LOC107051690 Neighboring gene protein disulfide isomerase family A member 6 Neighboring gene potassium voltage-gated channel modifier subfamily F member 1

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in lysosomal membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
V-type proton ATPase subunit C 2
Names
ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C2
XP_004935815.2
XP_004935816.2
XP_004935817.2
XP_015131569.2
XP_025004708.2
XP_025004709.2
XP_025004710.2
XP_025004711.2
XP_025004712.2
XP_040524770.1
XP_040524771.1
XP_040524772.1
XP_040524774.1
XP_040524775.1
XP_040524776.1
XP_040524777.1
XP_040524778.1
XP_040524779.1
XP_040524780.1
XP_040524781.1
XP_046770967.1
XP_419951.2

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    96602062..96618845
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025148940.3 → XP_025004708.2  V-type proton ATPase subunit C 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XGC2, A0A8V0XGD7
    Related
    ENSGALP00010003720.1, ENSGALT00010005976.1
    Conserved Domains (1) summary
    cd14785
    Location:4 → 384
    V-ATPase_C; Subunit C of vacuolar H+-ATPase (V-ATPase)

  2. XM_004935758.5 → XP_004935815.2  V-type proton ATPase subunit C 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Conserved Domains (1) summary
    cd14785
    Location:4 → 374
    V-ATPase_C; Subunit C of vacuolar H+-ATPase (V-ATPase)

  3. XM_025148941.3 → XP_025004709.2  V-type proton ATPase subunit C 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XGC2, A0A8V0XGD7
    Conserved Domains (1) summary
    cd14785
    Location:4 → 384
    V-ATPase_C; Subunit C of vacuolar H+-ATPase (V-ATPase)

  4. XM_004935759.5 → XP_004935816.2  V-type proton ATPase subunit C 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Conserved Domains (1) summary
    cd14785
    Location:4 → 374
    V-ATPase_C; Subunit C of vacuolar H+-ATPase (V-ATPase)

  5. XM_025148943.3 → XP_025004711.2  V-type proton ATPase subunit C 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XGC2, A0A8V0XGD7
    Conserved Domains (1) summary
    cd14785
    Location:4 → 384
    V-ATPase_C; Subunit C of vacuolar H+-ATPase (V-ATPase)

  6. XM_015276083.4 → XP_015131569.2  V-type proton ATPase subunit C 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Conserved Domains (1) summary
    cd14785
    Location:4 → 374
    V-ATPase_C; Subunit C of vacuolar H+-ATPase (V-ATPase)

  7. XM_025148942.3 → XP_025004710.2  V-type proton ATPase subunit C 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XGC2, A0A8V0XGD7
    Conserved Domains (1) summary
    cd14785
    Location:4 → 384
    V-ATPase_C; Subunit C of vacuolar H+-ATPase (V-ATPase)

  8. XM_419951.8 → XP_419951.2  V-type proton ATPase subunit C 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Related
    ENSGALP00010003705.1, ENSGALT00010005956.1
    Conserved Domains (1) summary
    cd14785
    Location:4 → 374
    V-ATPase_C; Subunit C of vacuolar H+-ATPase (V-ATPase)

  9. XM_025148944.3 → XP_025004712.2  V-type proton ATPase subunit C 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XGC2, A0A8V0XGD7
    Conserved Domains (1) summary
    cd14785
    Location:4 → 384
    V-ATPase_C; Subunit C of vacuolar H+-ATPase (V-ATPase)

  10. XM_004935760.5 → XP_004935817.2  V-type proton ATPase subunit C 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Conserved Domains (1) summary
    cd14785
    Location:4 → 374
    V-ATPase_C; Subunit C of vacuolar H+-ATPase (V-ATPase)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    96416407..96433187
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040668836.2 → XP_040524770.1  V-type proton ATPase subunit C 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Conserved Domains (2) summary
    cd14785
    Location:55 → 75
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 380
    V-ATPase_C; V-ATPase subunit C

  2. XM_040668842.2 → XP_040524776.1  V-type proton ATPase subunit C 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Conserved Domains (2) summary
    cd14785
    Location:55 → 75
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  3. XM_040668838.2 → XP_040524772.1  V-type proton ATPase subunit C 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Conserved Domains (2) summary
    cd14785
    Location:55 → 75
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 380
    V-ATPase_C; V-ATPase subunit C

  4. XM_040668843.2 → XP_040524777.1  V-type proton ATPase subunit C 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Conserved Domains (2) summary
    cd14785
    Location:55 → 75
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  5. XM_040668840.2 → XP_040524774.1  V-type proton ATPase subunit C 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Conserved Domains (2) summary
    cd14785
    Location:55 → 75
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 380
    V-ATPase_C; V-ATPase subunit C

  6. XM_040668846.2 → XP_040524780.1  V-type proton ATPase subunit C 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Conserved Domains (2) summary
    cd14785
    Location:55 → 75
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  7. XM_046915011.1 → XP_046770967.1  V-type proton ATPase subunit C 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XGC2

  8. XM_040668847.2 → XP_040524781.1  V-type proton ATPase subunit C 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Conserved Domains (2) summary
    cd14785
    Location:55 → 75
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  9. XM_040668837.2 → XP_040524771.1  V-type proton ATPase subunit C 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Conserved Domains (2) summary
    cd14785
    Location:55 → 75
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 380
    V-ATPase_C; V-ATPase subunit C

  10. XM_040668844.2 → XP_040524778.1  V-type proton ATPase subunit C 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Conserved Domains (2) summary
    cd14785
    Location:55 → 75
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C

  11. XM_040668841.2 → XP_040524775.1  V-type proton ATPase subunit C 2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Conserved Domains (2) summary
    cd14785
    Location:55 → 75
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 380
    V-ATPase_C; V-ATPase subunit C

  12. XM_040668845.2 → XP_040524779.1  V-type proton ATPase subunit C 2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XGC2
    Conserved Domains (2) summary
    cd14785
    Location:55 → 75
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:5 → 370
    V-ATPase_C; V-ATPase subunit C
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.