VNN2 vanin 2 [Gallus gallus (chicken)] - Gene

Summary

Symbol: VNN2provided by CGNC
Full Name: vanin 2provided by CGNC
Primary source: CGNC:51528
See related: Ensembl:ENSGALG00010004300
Gene type: protein coding
RefSeq status: VALIDATED
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as: VNN1; VNN3; VNN2VNN3
Orthologs: all
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Genomic context

Location:: chromosome: 3

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	3	NC_052534.1 (56479597..56489691)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	3	NC_052575.1 (56387755..56397847)

Chromosome 3 - NC_052534.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

This study suggests that miR-122 might play an important role in lipid metabolism in the chicken liver by negatively regulating the expression of the VNN1 gene.
Title: MiR-122 targets the vanin 1 gene to regulate its expression in chickens.

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: pantetheinase

Names: vanin 1; vanin 3

NP_001366187.2

EC 3.5.1.92

XP_046769953.1

EC 3.5.1.92

XP_046794817.1

EC 3.5.1.92

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001379258.2 → NP_001366187.2 pantetheinase precursor

Status: VALIDATED

Source sequence(s)

JAENSK010000063

UniProtKB/TrEMBL

A0A8V0XM46

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

56479597..56489691

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046938861.1 → XP_046794817.1 pantetheinase isoform X1

UniProtKB/TrEMBL

A0A8V0XM46

Related

ENSGALP00010005867.1, ENSGALT00010010040.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

56387755..56397847

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046913997.1 → XP_046769953.1 pantetheinase isoform X1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

NM_001039288.2: Suppressed sequence

Description

NM_001039288.2: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.