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CG17806 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

Gene ID: 42142, updated on 2-Nov-2024

Summary

Official Symbol
CG17806provided by FlyBase
Official Full Name
uncharacterized proteinprovided by FlyBase
Primary source
FLYBASE:FBgn0038548
Locus tag
Dmel_CG17806
See related
AllianceGenome:FB:FBgn0038548
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Drosophila melanogaster
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as
Dmel\CG17806
Summary
Predicted to enable DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See CG17806 in Genome Data Viewer
Location:
90C5-90C5; 3-61 cM
Exon count:
3
Annotation release Status Assembly Chr Location
Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (17801542..17803260, complement)
Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (13627264..13628982, complement)

Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Nicknack Neighboring gene uncharacterized protein Neighboring gene Oddjob

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

mobile_element

  • Loc: c17801705-17801635 mobile_element_type = transposon:INE-1{}4762

Gene Ontology Provided by FlyBase

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
 
enables DNA-binding transcription factor activity ISS
Inferred from Sequence or Structural Similarity
more info
 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 
enables transcription cis-regulatory region binding ISS
Inferred from Sequence or Structural Similarity
more info
 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
located_in nucleus ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
uncharacterized protein
Names
CG17806-PA

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NT_033777.3 Reference assembly

    Range
    17801542..17803260 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_142401.3NP_650658.1  uncharacterized protein Dmel_CG17806 [Drosophila melanogaster]

    See identical proteins and their annotated locations for NP_650658.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9VEF3
    Related
    FBpp0082951
    Conserved Domains (5) summary
    smart00451
    Location:375407
    ZnF_U1; U1-like zinc finger
    COG5048
    Location:298383
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:262282
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:260282
    zf-C2H2; Zinc finger, C2H2 type
    pfam07776
    Location:476
    zf-AD; Zinc-finger associated domain (zf-AD)