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NFATC1 nuclear factor of activated T-cells 1 [ Gallus gallus (chicken) ]

Gene ID: 420815, updated on 3-Dec-2024
Symbol
NFATC1provided by CGNC
Full Name
nuclear factor of activated T-cells 1provided by CGNC
Primary source
CGNC:9602
See related
Ensembl:ENSGALG00010007252
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Location:
chromosome: 2
Exon count:
15
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (56298216..56416297, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (56206790..56324810, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene potassium voltage-gated channel modifier subfamily G member 2 Neighboring gene uncharacterized LOC121109607 Neighboring gene CTD phosphatase subunit 1 Neighboring gene ATPase phospholipid transporting 9B (putative) Neighboring gene uncharacterized LOC121109609 Neighboring gene uncharacterized LOC121109608 Neighboring gene spalt like transcription factor 3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Lineage-based primary muscle fiber type diversification independent of MEF2 and NFAT in chick embryos. Theobald J, et al. J Muscle Res Cell Motil, 2011 Mar. PMID 21290171, Free PMC Article
  2. NFATC1 promotes epicardium-derived cell invasion into myocardium. Combs MD, et al. Development, 2011 May. PMID 21447555, Free PMC Article
  3. VEGF and RANKL regulation of NFATc1 in heart valve development. Combs MD, et al. Circ Res, 2009 Sep 11. PMID 19661463, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcineurin-NFAT signaling cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytokine production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
nuclear factor of activated T-cells, cytoplasmic 1
Names
nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    56298216..56416297 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015275940.4 → XP_015131426.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Y038
    Conserved Domains (2) summary
    cd07881
    Location:420 → 594
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cl15674
    Location:599 → 699
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

  2. XM_015275938.4 → XP_015131424.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0Y038
    Related
    ENSGALP00010009590.1, ENSGALT00010017315.1
    Conserved Domains (2) summary
    cd07881
    Location:420 → 594
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cl15674
    Location:599 → 699
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

  3. XM_015275936.4 → XP_015131422.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XX53, A0A8V0Y038
    Related
    ENSGALP00010009592.1, ENSGALT00010017318.1
    Conserved Domains (2) summary
    cd07881
    Location:420 → 594
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cl15674
    Location:599 → 699
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

  4. XM_046938126.1 → XP_046794082.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X6

    UniProtKB/TrEMBL
    A0A8V0Y038

  5. XM_015275937.4 → XP_015131423.2  nuclear factor of activated T-cells, cytoplasmic 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0XUC1, A0A8V0Y038
    Related
    ENSGALP00010009591.1, ENSGALT00010017316.1
    Conserved Domains (2) summary
    cd07881
    Location:401 → 575
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cl15674
    Location:580 → 680
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

  6. XM_004935096.5 → XP_004935153.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X8

    Conserved Domains (2) summary
    cl08275
    Location:3 → 130
    RHD-n; N-terminal sub-domain of the Rel homology domain (RHD)
    cl15674
    Location:135 → 235
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

  7. XM_015275939.4 → XP_015131425.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0Y038
    Conserved Domains (2) summary
    cd07881
    Location:420 → 594
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cl15674
    Location:599 → 699
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

  8. XM_015275941.4 → XP_015131427.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X7

    UniProtKB/TrEMBL
    A0A1D5PI24, A0A8V0XSC8
    Related
    ENSGALP00010009587.1, ENSGALT00010017306.1
    Conserved Domains (2) summary
    cd07881
    Location:420 → 594
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cl15674
    Location:599 → 699
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    56206790..56324810 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040663224.2 → XP_040519158.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X5

    UniProtKB/TrEMBL
    A0A8V0Y038
    Conserved Domains (2) summary
    cd07881
    Location:420 → 594
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cl15674
    Location:599 → 699
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

  2. XM_040663222.2 → XP_040519156.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X3

    UniProtKB/TrEMBL
    A0A8V0Y038
    Conserved Domains (2) summary
    cd07881
    Location:420 → 594
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cl15674
    Location:599 → 699
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

  3. XM_040663220.2 → XP_040519154.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0XX53, A0A8V0Y038
    Conserved Domains (2) summary
    cd07881
    Location:420 → 594
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cl15674
    Location:599 → 699
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

  4. XM_046912612.1 → XP_046768568.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X6

    UniProtKB/TrEMBL
    A0A8V0Y038

  5. XM_040663221.2 → XP_040519155.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0Y038
    Conserved Domains (2) summary
    cd07881
    Location:401 → 575
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cl15674
    Location:580 → 680
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

  6. XM_040663226.2 → XP_040519160.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X8

    Conserved Domains (2) summary
    cl08275
    Location:3 → 130
    RHD-n; N-terminal sub-domain of the Rel homology domain (RHD)
    cl15674
    Location:135 → 235
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

  7. XM_040663223.2 → XP_040519157.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X4

    UniProtKB/TrEMBL
    A0A8V0Y038
    Conserved Domains (2) summary
    cd07881
    Location:420 → 594
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cl15674
    Location:599 → 699
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...

  8. XM_040663225.2 → XP_040519159.1  nuclear factor of activated T-cells, cytoplasmic 1 isoform X7

    UniProtKB/TrEMBL
    A0A1D5PI24, A0A8V0XSC8
    Conserved Domains (2) summary
    cd07881
    Location:420 → 594
    RHD-n_NFAT; N-terminal sub-domain of the Rel homology domain (RHD) of nuclear factor of activated T-cells (NFAT) proteins
    cl15674
    Location:599 → 699
    IPT; Immunoglobulin-like fold, Plexins, Transcription factors (IPT). IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor ...
Nucleotide Protein
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