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CCR5 C-C motif chemokine receptor 5 [ Gallus gallus (chicken) ]

Gene ID: 420695, updated on 3-Dec-2024
Official Symbol
CCR5provided by CGNC
Official Full Name
C-C motif chemokine receptor 5provided by CGNC
Primary source
CGNC:51319
See related
Ensembl:ENSGALG00010017278
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
CCR1-L
Orthologs
human all
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See CCR5 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (42585581..42608756, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (42637423..42660506, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene CDV3 homolog Neighboring gene topoisomerase (DNA) II binding protein 1 Neighboring gene uncharacterized LOC124417711 Neighboring gene C-C motif chemokine receptor 2 Neighboring gene uncharacterized LOC124418336 Neighboring gene C-C chemokine receptor 8 like Neighboring gene uncharacterized LOC112531723

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Concerted evolution of vertebrate CCR2 and CCR5 genes and the origin of a recombinant equine CCR5/2 gene. Perelygin AA, et al. J Hered, 2008 Sep-Oct. PMID 18502735
  2. An expressed sequence tag analysis of the chicken reproductive tract transcriptome. Froman DP, et al. Poult Sci, 2006 Aug. PMID 16903475
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables C-C chemokine receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of monocyte chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
C-C chemokine receptor type 5
Names
C-C chemokine receptor 11 like

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001271141.1 → NP_001258070.1  C-C chemokine receptor type 5

    See identical proteins and their annotated locations for NP_001258070.1

    Status: VALIDATED

    Source sequence(s)
    DT658610, EF524205
    UniProtKB/TrEMBL
    B2BJC3, F1NPK9, Q702H8
    Conserved Domains (1) summary
    cd15184
    Location:35 → 311
    7tmA_CCR5_CCR2; CC chemokine receptor types 5 and 2, member of the class A family of seven-transmembrane G protein-coupled receptors

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    42585581..42608756 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040682507.2 → XP_040538441.1  C-C chemokine receptor type 5 isoform X2

    UniProtKB/TrEMBL
    B2BJC3, F1NPK9, Q702H8
    Related
    ENSGALP00010024369.1, ENSGALT00010041661.1
    Conserved Domains (1) summary
    cd15184
    Location:35 → 311
    7tmA_CCR5_CCR2; CC chemokine receptor types 5 and 2, member of the class A family of seven-transmembrane G protein-coupled receptors

  2. XM_025147219.3 → XP_025002987.1  C-C chemokine receptor type 5 isoform X2

    UniProtKB/TrEMBL
    B2BJC3, F1NPK9, Q702H8
    Related
    ENSGALP00010024371.1, ENSGALT00010041665.1
    Conserved Domains (1) summary
    cd15184
    Location:35 → 311
    7tmA_CCR5_CCR2; CC chemokine receptor types 5 and 2, member of the class A family of seven-transmembrane G protein-coupled receptors

  3. XM_025147218.3 → XP_025002986.2  C-C chemokine receptor type 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z0C7, A0A8V0Z1Q5
    Related
    ENSGALP00010024361.1, ENSGALT00010041648.1
    Conserved Domains (1) summary
    cd15184
    Location:133 → 409
    7tmA_CCR5_CCR2; CC chemokine receptor types 5 and 2, member of the class A family of seven-transmembrane G protein-coupled receptors

  4. XM_025147220.3 → XP_025002988.1  C-C chemokine receptor type 5 isoform X2

    UniProtKB/TrEMBL
    B2BJC3, F1NPK9, Q702H8
    Related
    ENSGALP00010024364.1, ENSGALT00010041656.1
    Conserved Domains (1) summary
    cd15184
    Location:35 → 311
    7tmA_CCR5_CCR2; CC chemokine receptor types 5 and 2, member of the class A family of seven-transmembrane G protein-coupled receptors

  5. XM_040682508.2 → XP_040538442.1  C-C chemokine receptor type 5 isoform X2

    UniProtKB/TrEMBL
    B2BJC3, F1NPK9, Q702H8
    Related
    ENSGALP00010024359.1, ENSGALT00010041643.1
    Conserved Domains (1) summary
    cd15184
    Location:35 → 311
    7tmA_CCR5_CCR2; CC chemokine receptor types 5 and 2, member of the class A family of seven-transmembrane G protein-coupled receptors

  6. XM_046923335.1 → XP_046779291.1  C-C chemokine receptor type 5 isoform X2

    UniProtKB/TrEMBL
    B2BJC3, F1NPK9, Q702H8
    Related
    ENSGALP00010024363.1, ENSGALT00010041651.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    42637423..42660506 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046911239.1 → XP_046767195.1  C-C chemokine receptor type 5 isoform X2

    UniProtKB/TrEMBL
    B2BJC3, F1NPK9, Q702H8

  2. XM_046911237.1 → XP_046767193.1  C-C chemokine receptor type 5 isoform X2

    UniProtKB/TrEMBL
    B2BJC3, F1NPK9, Q702H8

  3. XM_046911236.1 → XP_046767192.1  C-C chemokine receptor type 5 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z1Q5

  4. XM_046911238.1 → XP_046767194.1  C-C chemokine receptor type 5 isoform X2

    UniProtKB/TrEMBL
    B2BJC3, F1NPK9, Q702H8

  5. XM_046911241.1 → XP_046767197.1  C-C chemokine receptor type 5 isoform X2

    UniProtKB/TrEMBL
    B2BJC3, F1NPK9, Q702H8

  6. XM_046911240.1 → XP_046767196.1  C-C chemokine receptor type 5 isoform X2

    UniProtKB/TrEMBL
    B2BJC3, F1NPK9, Q702H8
Nucleotide Protein Strain
Heading Accession and Version

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