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RUNDC3B RUN domain containing 3B [ Gallus gallus (chicken) ]

Gene ID: 420535, updated on 5-Mar-2024

Summary

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Symbol
RUNDC3Bprovided by CGNC
Full Name
RUN domain containing 3Bprovided by CGNC
Primary source
CGNC:6802
See related
Ensembl:ENSGALG00010004226
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
15
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (20675681..20720757)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (20704593..20749684)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene ATP-binding cassette, sub-family B (MDR/TAP), member 1-like A Neighboring gene ATP binding cassette subfamily B member 1 Neighboring gene solute carrier family 25 member 40 Neighboring gene DBF4 zinc finger Neighboring gene ADAM metallopeptidase domain 22

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
RUN domain-containing protein 3B
Names
Rap2-binding protein 9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001030972.2 → NP_001026143.1  RUN domain-containing protein 3B isoform 1

    See identical proteins and their annotated locations for NP_001026143.1

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000036
    UniProtKB/TrEMBL
    A0A3Q2UB46, F1NV41, Q5ZHZ2
    Related
    ENSGALP00010005759.1, ENSGALT00010009876.1
    Conserved Domains (2) summary
    pfam02759
    Location:59 → 182
    RUN; RUN domain
    pfam11315
    Location:220 → 291
    Med30; Mediator complex subunit 30

  2. NM_001389321.2 → NP_001376250.1  RUN domain-containing protein 3B isoform 2

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000036
    UniProtKB/TrEMBL
    A0A3Q2U409
    Related
    ENSGALP00010005767.1, ENSGALT00010009884.1
    Conserved Domains (1) summary
    pfam02759
    Location:59 → 180
    RUN; RUN domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    20675681..20720757
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046922000.1 → XP_046777956.1  RUN domain-containing protein 3B isoform X1

  2. XM_046922006.1 → XP_046777962.1  RUN domain-containing protein 3B isoform X1

  3. XM_046922004.1 → XP_046777960.1  RUN domain-containing protein 3B isoform X1

  4. XM_046922009.1 → XP_046777965.1  RUN domain-containing protein 3B isoform X1

  5. XM_046921998.1 → XP_046777954.1  RUN domain-containing protein 3B isoform X1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    20704593..20749684
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046911020.1 → XP_046766976.1  RUN domain-containing protein 3B isoform X1

  2. XM_046911022.1 → XP_046766978.1  RUN domain-containing protein 3B isoform X1

  3. XM_046911021.1 → XP_046766977.1  RUN domain-containing protein 3B isoform X1

  4. XM_046911023.1 → XP_046766979.1  RUN domain-containing protein 3B isoform X1

  5. XM_046911019.1 → XP_046766975.1  RUN domain-containing protein 3B isoform X1

Nucleotide Protein Strain
Heading Accession and Version

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