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HADH hydroxyacyl-CoA dehydrogenase [ Gallus gallus (chicken) ]

Gene ID: 420290, updated on 5-Mar-2024

Summary

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Symbol
HADHprovided by CGNC
Full Name
hydroxyacyl-CoA dehydrogenaseprovided by CGNC
Primary source
CGNC:12053
See related
Ensembl:ENSGALG00010005634
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See HADH in Genome Data Viewer
Location:
chromosome: 4
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (37515395..37532315, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (37468592..37485509, complement)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110572 Neighboring gene uncharacterized LOC107051763 Neighboring gene lymphoid enhancer binding factor 1 Neighboring gene cytochrome P450 family 2 subfamily U member 1 Neighboring gene sphingomyelin synthase 2 Neighboring gene uncharacterized LOC121110730

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3-hydroxyacyl-CoA dehydrogenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables NAD+ binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fatty acid beta-oxidation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hydroxyacyl-coenzyme A dehydrogenase, mitochondrial
Names
hydroxyacyl-Coenzyme A dehydrogenase
NP_001264826.1
XP_040554707.1
XP_046771626.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001277897.2 → NP_001264826.1  hydroxyacyl-coenzyme A dehydrogenase, mitochondrial

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000073
    UniProtKB/TrEMBL
    A0A8V0XIN4, E1BZH9
    Related
    ENSGALP00010008014.1, ENSGALT00010013497.1
    Conserved Domains (3) summary
    COG1250
    Location:28 → 314
    FadB; 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]
    pfam00725
    Location:217 → 314
    3HCDH; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
    pfam02737
    Location:30 → 215
    3HCDH_N; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    37515395..37532315 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040698773.2 → XP_040554707.1  hydroxyacyl-coenzyme A dehydrogenase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A8V0XIM8
    Related
    ENSGALP00010008010.1, ENSGALT00010013491.1
    Conserved Domains (1) summary
    COG1250
    Location:113 → 381
    FadB; 3-hydroxyacyl-CoA dehydrogenase [Lipid transport and metabolism]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    37468592..37485509 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046915670.1 → XP_046771626.1  hydroxyacyl-coenzyme A dehydrogenase, mitochondrial isoform X1

Nucleotide Protein Strain
Heading Accession and Version

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