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ZNF652 zinc finger protein 652 [ Gallus gallus (chicken) ]

Gene ID: 419987, updated on 17-Aug-2024
Symbol
ZNF652provided by CGNC
Full Name
zinc finger protein 652provided by CGNC
Primary source
CGNC:873
See related
Ensembl:ENSGALG00010024430
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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See ZNF652 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
6
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 27 NC_052558.1 (3202763..3228447)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 27 NC_052599.1 (4334710..4360213)

Chromosome 27 - NC_052558.1Genomic Context describing neighboring genes Neighboring gene DEAH-box helicase 8 Neighboring gene serine/arginine-rich splicing factor SR45-like Neighboring gene prohibitin Neighboring gene phosphoethanolamine/phosphocholine phosphatase Neighboring gene ABI family member 3 Neighboring gene G protein subunit gamma transducin 2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription activator activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
zinc finger protein 652

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052558.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    3202763..3228447
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003642788.6 → XP_003642836.1  zinc finger protein 652 isoform X1

    UniProtKB/TrEMBL
    E1BQL6
    Related
    ENSGALP00010036403.1, ENSGALT00010059604.1
    Conserved Domains (5) summary
    PLN03086
    Location:243 → 307
    PLN03086; PRLI-interacting factor K; Provisional
    COG5048
    Location:253 → 462
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:440 → 491
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:390 → 410
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:458 → 482
    zf-H2C2_2; Zinc-finger double domain

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052599.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4334710..4360213
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040691911.2 → XP_040547845.1  zinc finger protein 652 isoform X1

    UniProtKB/TrEMBL
    E1BQL6
    Conserved Domains (5) summary
    PLN03086
    Location:243 → 307
    PLN03086; PRLI-interacting factor K; Provisional
    COG5048
    Location:253 → 462
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:440 → 491
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:390 → 410
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:458 → 482
    zf-H2C2_2; Zinc-finger double domain

  2. XM_046933537.1 → XP_046789493.1  zinc finger protein 652 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

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