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FTSJ3 FtsJ homolog 3 [ Gallus gallus (chicken) ]

Gene ID: 419943, updated on 5-Sep-2025
Symbol
FTSJ3provided by CGNC
Full Name
FtsJ homolog 3provided by CGNC
Primary source
CGNC:51133
See related
Ensembl:ENSGALG00010026218
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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See FTSJ3 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
22
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 27 NC_052558.1 (1345346..1352226, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 27 NC_052599.1 (2564287..2571161, complement)

Chromosome 27 - NC_052558.1Genomic Context describing neighboring genes Neighboring gene proline rich 29 Neighboring gene alpha-2-macroglobulin like 4 Neighboring gene proteasome 26S subunit, ATPase 5 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. A large database of chicken bursal ESTs as a resource for the analysis of vertebrate gene function. Abdrakhmanov I, et al. Genome Res, 2000 Dec. PMID 11116100, Free PMC Article
  2. Development of a chicken 5 K microarray targeted towards immune function. Smith J, et al. BMC Genomics, 2006 Mar 13. PMID 16533398, Free PMC Article
  3. Expressed sequence tag analysis of Eimeria-stimulated intestinal intraepithelial lymphocytes in chickens. Min W, et al. Mol Biotechnol, 2005 Jun. PMID 15920284
  4. Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution. International Chicken Genome Sequencing Consortium. Nature, 2004 Dec 9. PMID 15592404
  5. ESTs from brain and testis of White Leghorn and red junglefowl: annotation, bioinformatic classification of unknown transcripts and analysis of expression levels. Savolainen P, et al. Cytogenet Genome Res, 2005. PMID 16093725

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA (guanine) methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables rRNA (uridine-2'-O-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in rRNA methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of preribosome, large subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Preferred Names
pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3
Names
FtsJ RNA methyltransferase homolog 3
pre-rRNA processing protein FTSJ3
rRNA (uridine-2'-O-)-methyltransferase 3
NP_001382866.1
XP_040509082.1
XP_046789287.1

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001395937.1 → NP_001382866.1  pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3

    Status: VALIDATED

    Source sequence(s)
    AJ720063, AJ721286, AJ721290, AJ721293, AJ721294, AM063066, AM063197, BU204058, BU232309, BU379932, CN237781, HAEK01041261, JAENSK010000363
    UniProtKB/Swiss-Prot
    Q5ZKM1
    Related
    ENSGALP00010039347.1, ENSGALT00010063814.1
    Conserved Domains (3) summary
    COG0293
    Location:4 → 203
    RlmE; 23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ [Translation, ribosomal structure and biogenesis]
    pfam07780
    Location:635 → 821
    Spb1_C; Spb1 C-terminal domain
    pfam11861
    Location:233 → 329
    DUF3381; Domain of unknown function (DUF3381)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052558.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    1345346..1352226 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040653148.2 → XP_040509082.1  pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZKM1
    Conserved Domains (3) summary
    COG0293
    Location:4 → 203
    RlmE; 23S rRNA U2552 (ribose-2'-O)-methylase RlmE/FtsJ [Translation, ribosomal structure and biogenesis]
    pfam07780
    Location:635 → 821
    Spb1_C; Spb1 C-terminal domain
    pfam11861
    Location:233 → 329
    DUF3381; Domain of unknown function (DUF3381)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052599.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    2564287..2571161 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046933331.1 → XP_046789287.1  pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 isoform X1

    UniProtKB/Swiss-Prot
    Q5ZKM1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001030925.2: Suppressed sequence

    Description
    NM_001030925.2: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5ZKM1.2 GenPept UniProtKB/Swiss-Prot:Q5ZKM1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials